CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57590	Soybean	nucleus	94.33	97.46
CDY68772	Canola	endoplasmic reticulum, golgi	66.75	81.63
GSMUA_Achr11P...	Banana	cytosol, plastid	67.49	81.31
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	66.01	80.72
PGSC0003DMT400062265	Potato	plastid	77.09	78.84
Solyc08g077200.2.1	Tomato	plastid	76.85	78.59
VIT_02s0012g00530.t01	Wine grape	plastid	76.35	78.09
Bra023263.1-P	Field mustard	plastid	75.62	77.72
Bra005344.1-P	Field mustard	plastid	76.35	77.69
CDX84209	Canola	plastid	76.35	77.69
CDY31684	Canola	plastid	76.35	77.69
AT2G35390.2	Thale cress	plastid	77.09	77.67
CDY01279	Canola	plastid	75.86	77.58
CDX93837	Canola	plastid	75.62	77.33
AT1G32380.1	Thale cress	plastid	75.86	77.0
CDY32299	Canola	plastid	75.86	75.86
HORVU6Hr1G015080.5	Barley	mitochondrion	68.23	74.06
KRH66354	Soybean	nucleus	72.17	72.52
Os02t0127700-02	Rice	plastid	70.69	72.47
KRH48933	Soybean	plastid	71.67	72.39
EES06216	Sorghum	plastid	69.95	71.36
Zm00001d015115_P001	Maize	plastid	69.95	71.18
PGSC0003DMT400068395	Potato	plastid	69.46	70.5
TraesCS6B01G110600.1	Wheat	plastid	69.7	70.05
Solyc06g061040.2.1	Tomato	plastid	69.46	69.98
TraesCS6A01G088200.2	Wheat	nucleus	69.46	69.98
TraesCSU01G018200.1	Wheat	plastid	69.46	69.98
Bra010159.1-P	Field mustard	plastid	26.85	47.81
KRH46053	Soybean	cytosol, nucleus	18.97	24.06
KRG98919	Soybean	cytosol	18.72	23.75
KRH69621	Soybean	plastid	19.7	19.61
KRH74537	Soybean	endoplasmic reticulum, plastid	19.46	19.36

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100794730	Gene3D:3.40.50.2020	MapMan:50.2.7	EMBL:ACUP02010397
EnsemblPlantsGene:GLYMA_17G153200	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	UniProt:I1MVC6	EnsemblPlants:KRH04308
ProteinID:KRH04308	ProteinID:KRH04308.1	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like
InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N
InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI00023D5600
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:12828582..12832514

Molecular Weight (calculated)

44022.0 Da

IEP (calculated)

8.215

GRAVY (calculated)

0.001

Length

406 amino acids

Sequence
(BLAST)

001: MASSLFQPSP SSAMTLSSSS TSSSSSLFTG TLRTLGFVDH SRARISAPNT VKCDMSESSN FVNGKPIIPV LNERTLPKFM ESAREAKTVS RNSNRLKLFS
101: GRANPTLSQE IARYMGLELG KISIKRFADG EIYVQLQESV RGCNVYLIQP TCPPANENLM ELKIMIDACR RASAKNITAV IPYFGYARAD RKTQGRESIA
201: AKLVANLITK AGADRVLACD LHSGQSMGYF DIPVDHVHCQ PVILDYLASK MISSSDLVVV SPDVGGVARA RAFAKKLSDA PLAIVDKRRH GHNVAEVMNL
301: IGDVKGKVAV MVDDMIDTAG TIAEGAALLH EEGAREVYAC CTHAVFSPPA IERLSSGLFH EVIITNTIPV AEKNYFPQLT IITVANLLGE TIWRVHDDSS
401: VSSIFQ

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.