CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66354	Soybean	nucleus	97.26	96.78
Solyc10g024410.1.1	Tomato	cytosol, nucleus	66.67	92.41
GSMUA_Achr11P...	Banana	cytosol, plastid	74.13	88.43
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	69.9	84.64
VIT_15s0021g00460.t01	Wine grape	plastid	80.35	80.15
CDY23440	Canola	plastid	75.87	79.43
HORVU6Hr1G015080.5	Barley	mitochondrion	73.88	79.41
CDY30476	Canola	plastid	78.61	78.8
AT2G44530.1	Thale cress	plastid	76.12	77.67
Os02t0127700-02	Rice	plastid	76.37	77.53
EES06216	Sorghum	plastid	75.62	76.38
Bra037645.1-P	Field mustard	plastid	78.61	76.33
PGSC0003DMT400056411	Potato	plastid	75.12	76.26
Zm00001d015115_P001	Maize	plastid	74.88	75.44
KRH57590	Soybean	nucleus	72.89	74.55
TraesCS6A01G088200.2	Wheat	nucleus	74.13	73.95
TraesCS6B01G110600.1	Wheat	plastid	74.13	73.76
TraesCSU01G018200.1	Wheat	plastid	73.88	73.7
KRH04308	Soybean	plastid	72.39	71.67
KRH46053	Soybean	cytosol, nucleus	18.66	23.44
KRG98919	Soybean	cytosol	18.41	23.12
KRH69621	Soybean	plastid	20.15	19.85
KRH74537	Soybean	endoplasmic reticulum, plastid	19.4	19.12

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100789585	Gene3D:3.40.50.2020	MapMan:50.2.7	EMBL:ACUP02004316
EnsemblPlantsGene:GLYMA_07G122000	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	UniProt:I1KJD2	EnsemblPlants:KRH48933
ProteinID:KRH48933	ProteinID:KRH48933.1	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like
InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N
InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI0002338933

Description

hypothetical protein

Coordinates

chr7:-:14275798..14289783

Molecular Weight (calculated)

43361.1 Da

IEP (calculated)

6.919

GRAVY (calculated)

0.054

Length

402 amino acids

Sequence
(BLAST)

001: MSTLLHSAST SSPSFSQITT PRFAPITRIS LRNGVRCKAI EAVNLENGRP SASEFLVSGS GNAIPRYVVA PNTRIQDLVN RNDTRLRIFS GTANPALAQE
101: IACYLGLELG KTKIKRFADG EIYVQLQESV RGCDVFLVQP TCPPANENLM ELLIMIDACR RASAKNITAV IPYFGYARAD RKTQGRESIA AKLVANLITE
201: AGANRVLACD LHSGQSMGYF DIPVDHVYGQ SVILDYLASK TICSDDLVVV SPDVGGVARA RAFAKKLSDA PLAIVDKRRH GHNVAEVMNL IGDVRGKVAV
301: MVDDMIDTAG TIAKGAALLH QEGAREVYAC TTHAVFSPPA IERLSSGLFQ EVIITNTIPV AEQNYFPQLT VLSVANLLGE TVWRVHDDCS GGIEPYSSLG
401: ID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.