Factsheet for VIT_15s0021g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g024410.1.1	Tomato	cytosol, nucleus	67.74	94.14
GSMUA_Achr11P...	Banana	cytosol, plastid	75.68	90.5
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	69.23	84.04
KRH48933	Soybean	plastid	80.15	80.35
KRH66354	Soybean	nucleus	80.4	80.2
HORVU6Hr1G015080.5	Barley	mitochondrion	73.7	79.41
PGSC0003DMT400056411	Potato	plastid	75.93	77.27
AT2G44530.1	Thale cress	plastid	75.19	76.9
Os02t0127700-02	Rice	plastid	75.43	76.77
CDY23440	Canola	plastid	72.21	75.78
EES06216	Sorghum	plastid	74.44	75.38
CDY30476	Canola	plastid	74.94	75.31
Zm00001d015115_P001	Maize	plastid	74.19	74.94
VIT_02s0012g00530.t01	Wine grape	plastid	73.7	74.81
TraesCS6B01G110600.1	Wheat	plastid	74.44	74.26
TraesCS6A01G088200.2	Wheat	nucleus	74.19	74.19
TraesCSU01G018200.1	Wheat	plastid	73.7	73.7
Bra037645.1-P	Field mustard	plastid	74.94	72.95
VIT_12s0142g00090.t01	Wine grape	cytosol	17.62	21.78
VIT_00s0225g00140.t01	Wine grape	plastid	19.6	20.1

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100244506	wikigene:100244506	Gene3D:3.40.50.2020	MapMan:50.2.7
ProteinID:CBI16733	ProteinID:CBI16733.3	UniProt:D7SM55	EMBL:FN594952	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009156	GO:GO:0009165	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249
EntrezGene:LOC100244506	wikigene:LOC100244506	HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like
InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS	ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF86	InterPro:Pribosyltran_N
InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac	SMART:SM01400	SUPFAM:SSF53271	TIGR:TC56106	TIGRFAMs:TIGR01251
UniParc:UPI0001984C18	ArrayExpress:VIT_15s0021g00460	EnsemblPlantsGene:VIT_15s0021g00460	EnsemblPlants:VIT_15s0021g00460.t01	unigene:Vvi.294	RefSeq:XP_002265309
RefSeq:XP_002265309.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr15:+:10010002..10022394

Molecular Weight (calculated)

43906.8 Da

IEP (calculated)

6.593

GRAVY (calculated)

0.022

Length

403 amino acids

Sequence
(BLAST)

001: MALSLFHSTS SSIAFSSSSP YSPSSPFAIP FPTHRLSPRN TVRCNLVEPV KFNNGRPFIP VLREPTLPNF LSSKDMEETI NKNDTRLRIF SGTANPALSQ
101: EIACYMGLEL GKINIKRFAD GEIYVQLQES VRGCDVYLVQ PTCPPANENL MELLIMIDAC RRASAKNITA VIPYFGYARA DRKTQGRESI AAKLVANLIT
201: EAGANRVLAC DLHSGQSMGY FDIPVDHVYG QPVILDYLAS KTICSDDLIV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR HGHNVAEVMN LIGDVKGKVA
301: VMVDDMIDTA GTIAKGAALL HQEGAREVYA CSTHAVFSPP AIQRLSSGLF QEVIITNTIP VLEQNYFPQL TVLSVANLLG ETIWRVHDDC SSGFEPYSSL
401: GID

Best Arabidopsis Sequence Match ( AT2G44530.1 )
(BLAST)

001: MASIVQPSPT FPALNLRRSS LIRPPSSVRF PLKCNAADPY KFDGGNSAGF HLLTGDTVPA SFSRTRLEDS IYQNTTRLRI FSGTANPILA QEISCYLGLD
101: LGKIKIKRFA DGEIYVQLQE SVRGCDVFLV QPTCPPANEN LMELLVMIDA CRRASAKTIT AVIPYFGYAR ADRKTQGRES IAAKLVANLI TQSGADRVLA
201: CDLHSGQSMG YFDIPVDHVY GQPVILDYLA SKAISSEDLV VVSPDVGGVA RARAFAKKLS DAPLAIVDKR RHGHNVAEVM NLIGDVKGKV AIMVDDMIDT
301: AGTISKGAAL LHQEGAREVY ACTTHAVFSP PAISRLSSGL FQEVIITNTI PLSEKNYFPQ LTVLSVANLL GETIWRVHDD CSGAIEPFST LGID

Arabidopsis Description

PRS5Ribose-phosphate pyrophosphokinase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64888]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.