Factsheet for VIT_02s0012g00530.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, plastid	69.77	82.2
CDY68772	Canola	endoplasmic reticulum, golgi	66.75	79.82
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	66.75	79.82
KRH57590	Soybean	nucleus	78.34	79.13
Solyc08g077200.2.1	Tomato	plastid	78.34	78.34
PGSC0003DMT400062265	Potato	plastid	78.34	78.34
Bra005344.1-P	Field mustard	plastid	77.58	77.19
CDY31684	Canola	plastid	77.58	77.19
CDX84209	Canola	plastid	77.33	76.94
AT2G35390.2	Thale cress	plastid	77.58	76.43
KRH04308	Soybean	plastid	78.09	76.35
Bra023263.1-P	Field mustard	plastid	75.57	75.95
AT1G32380.1	Thale cress	plastid	76.32	75.75
CDY01279	Canola	plastid	75.57	75.57
CDX93837	Canola	plastid	75.31	75.31
HORVU6Hr1G015080.5	Barley	mitochondrion	70.78	75.13
CDY32299	Canola	plastid	75.57	73.89
VIT_15s0021g00460.t01	Wine grape	plastid	74.81	73.7
Os02t0127700-02	Rice	plastid	71.54	71.72
EES06216	Sorghum	plastid	71.54	71.36
PGSC0003DMT400068395	Potato	plastid	71.28	70.75
Zm00001d015115_P001	Maize	plastid	71.03	70.68
TraesCS6A01G088200.2	Wheat	nucleus	71.28	70.22
TraesCS6B01G110600.1	Wheat	plastid	71.28	70.05
Solyc06g061040.2.1	Tomato	plastid	70.78	69.73
TraesCSU01G018200.1	Wheat	plastid	70.78	69.73
Bra010159.1-P	Field mustard	plastid	28.21	49.12
VIT_12s0142g00090.t01	Wine grape	cytosol	17.88	21.78
VIT_00s0225g00140.t01	Wine grape	plastid	18.64	18.83

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	EntrezGene:100260851	wikigene:100260851	Gene3D:3.40.50.2020	MapMan:50.2.7
EMBL:AM432499	ProteinID:CAN82491	ProteinID:CAN82491.1	ProteinID:CBI33951	ProteinID:CBI33951.3	UniProt:D7TTH1
EMBL:FN596247	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009156
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	GO:GO:0044249	EntrezGene:LOC100260851	wikigene:LOC100260851
HAMAP:MF_00583_B	PFAM:PF13793	PFAM:PF14572	InterPro:PRTase-like	InterPro:PRibTrfase_dom	InterPro:PRib_PP_synth_CS
ScanProsite:PS00114	PANTHER:PTHR10210	PANTHER:PTHR10210:SF54	InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	InterPro:Rib-P_diPkinase_bac
SMART:SM01400	SUPFAM:SSF53271	TIGR:TC59229	TIGRFAMs:TIGR01251	UniParc:UPI0001982C96	ArrayExpress:VIT_02s0012g00530
EnsemblPlantsGene:VIT_02s0012g00530	EnsemblPlants:VIT_02s0012g00530.t01	unigene:Vvi.2220	RefSeq:XP_002282232	RefSeq:XP_002282232.1	:

Description

No Description!

Coordinates

chr2:+:6378170..6384087

Molecular Weight (calculated)

43762.8 Da

IEP (calculated)

7.824

GRAVY (calculated)

-0.028

Length

397 amino acids

Sequence
(BLAST)

001: MASLSLSAPS YHAESLVSRY SLRQSSFLPN ESRYRFQVAS VIKCDMNESL KFENGKPCVP VLNDRTFPSF LESRRMEKSV SRNSDRLKIF SGTANPTLSK
101: EIAWYMGKEL GKINIKRFAD GEIYVQLEES VRGCDVYLVQ PTCPPANENL MELLIMIDAC RRASAKTVTA VVPYFGYARS DRKTQGRESI AAKLVANVIT
201: KAGADRVLAC DLHSGQSMGY FDIPVDHIYC QPVILDYLAS KTICCNDLVV VSPDVGGVAR ARAFAKKLSD APLAIVDKRR QGHNVAEVMN LIGDVKGKVA
301: VMVDDMIDTA GTITKGAALL HQEGAREVYA CCTHAVFSPP AIERLTSGLF QEVIITNTIP TQEKNYFPQL TVLSVANLLG ETIWRIHDDC SVSSIFL

Best Arabidopsis Sequence Match ( AT2G35390.2 )
(BLAST)

001: MASLGLSFPP AAKTPTYLAS SSSTFFSNSS LSVRTSQFRS RNSVFACVKC DMPESLNVGN GNPSIPIINE RTLPKFLESA RMEKSVNRTN TRLKLFSGTA
101: NPALAQEIAW YMGLDLGKVN IKRFADGEIY VQLQESVRGC DVYLVQPTCT PTNENLMELL IMVDACRRAS AKKVTAVIPY FGYARADRKT QGRESIAAKL
201: VANLITEAGA DRVLACDLHS GQSMGYFDIP VDHVYCQPVI LDYLASKSIP SEDLVVVSPD VGGVARARAF AKKLSDAPLA IVDKRRSGHN VAEVMNLIGD
301: VRGKVAIMVD DMIDTAGTIV KGAALLHQEG AREVYACCTH AVFSPPAIER LSGGLLQEVI VTNTLPVAEK NYFPQLTILS VANLLGETIW RVHDDSSVSS
401: IFL

Arabidopsis Description

PRS1Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42581]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.