Factsheet for Bra010159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010996.1-P
Bra012474.1-P
Bra024741.1-P
Bra035030.1-P
Bra039992.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32380.1	Bra010996.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra012474.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra024741.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra035030.1-P	AT1G25490.1	21798944
AT1G32380.1	Bra039992.1-P	AT1G25490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68772	Canola	endoplasmic reticulum, golgi	53.07	36.45
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	48.25	33.13
GSMUA_Achr11P...	Banana	cytosol, plastid	48.68	32.94
Bra023263.1-P	Field mustard	plastid	52.19	30.13
Bra005344.1-P	Field mustard	plastid	52.63	30.08
AT1G32380.1	Thale cress	plastid	52.19	29.75
HORVU6Hr1G015080.5	Barley	mitochondrion	47.81	29.14
Os02t0127700-02	Rice	plastid	50.0	28.79
EES06216	Sorghum	plastid	50.0	28.64
Zm00001d015115_P001	Maize	plastid	49.56	28.32
VIT_02s0012g00530.t01	Wine grape	plastid	49.12	28.21
KRH57590	Soybean	nucleus	48.25	27.99
PGSC0003DMT400062265	Potato	plastid	48.68	27.96
Solyc08g077200.2.1	Tomato	plastid	48.68	27.96
TraesCS6A01G088200.2	Wheat	nucleus	48.25	27.3
TraesCS6B01G110600.1	Wheat	plastid	48.25	27.23
Bra037645.1-P	Field mustard	plastid	49.12	27.05
TraesCSU01G018200.1	Wheat	plastid	47.81	27.05
KRH04308	Soybean	plastid	47.81	26.85
Solyc06g061040.2.1	Tomato	plastid	46.93	26.55
PGSC0003DMT400068395	Potato	plastid	46.49	26.5
Bra000280.1-P	Field mustard	cytosol	16.67	11.24
Bra004730.1-P	Field mustard	cytosol	16.67	11.08
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	13.16	6.17

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:50.2.7	EnsemblPlantsGene:Bra010159	EnsemblPlants:Bra010159.1
EnsemblPlants:Bra010159.1-P	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009165	GO:GO:0009987
GO:GO:0016740	UniProt:M4D110	PFAM:PF13793	InterPro:PRTase-like	PANTHER:PTHR10210	PANTHER:PTHR10210:SF54
InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	SMART:SM01400	SUPFAM:SSF53271	TIGRFAMs:TIGR01251	UniParc:UPI000253F7D1
SEG:seg	:	:	:	:	:

Description

AT1G32380 (E=7e-057) | ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2)

Coordinates

chrA06:+:20246785..20248019

Molecular Weight (calculated)

24214.1 Da

IEP (calculated)

9.265

GRAVY (calculated)

0.068

Length

228 amino acids

Sequence
(BLAST)

001: MASLALTSPP GVKVPSYLAS SSSSLFSCSS ISNSAVSSLV SSWNSIIHTH YKCNLPKALN LGNGTTLPKY FDSSSRIKRF ADGEVYVQLK ESVRGCDVFL
101: VQPTCTPTNE NLMELLILVD ACRRASAKKV TAVIPYFGYA RADRKTQGRE SIAAKLVANL VTEAGADRVL ACDLHSGQSM GYFDIRAVPL VAAGTGGKGS
201: VNILRHISLT QEATLTLHPN AASCGVSR

Best Arabidopsis Sequence Match ( AT1G32380.1 )
(BLAST)

001: MASLALTSPP SVKIPSYLSS SSSSLFSRSS ISFRTTESRS RICVSGYAKC NLPKALNGNA RVPIINETTI PKFFDSSRLE KSVSRNNTKL KLFSGTANPA
101: LSQEIAWYMG LELGKVSIKR FADGEIYVQL KESVRGCDVF LVQPTCTPTN ENLMELLIMV DACRRASAKK VTAVIPYFGY ARADRKTQGR ESIAAKLVAN
201: LITEAGADRV LACDLHSGQS MGYFDIPVDH VYCQPVILDY LASKSISSED LVVVSPDVGG VARARAFAKK LSDAPLAIVD KRRHGHNVAE VMNLIGDVKG
301: KVAVMVDDII DTAGTIVKGA ALLHEEGARE VYACCTHAVF SPPAIERLSS GLLQEVIVTN TLPVAEKNYF PQLTILSVAN LLGETIWRVH DDSSVSSIFL

Arabidopsis Description

PRS2Ribose-phosphate pyrophosphokinase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q42583]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.