Factsheet for GSMUA_Achr2P14200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G068700.3	Barley	cytosol	81.85	74.92
PGSC0003DMT400035565	Potato	cytosol	31.35	74.8
GSMUA_Achr8P25470_001	Banana	cytosol, golgi, mitochondrion	77.56	73.67
GSMUA_Achr9P27600_001	Banana	cytosol	76.24	72.41
Solyc04g039650.2.1	Tomato	plastid	18.81	72.15
VIT_00s0225g00140.t01	Wine grape	plastid	83.83	64.63
Os01t0723600-01	Rice	plastid	84.49	62.59
EES01390	Sorghum	plastid	83.83	62.41
TraesCS3A01G285700.1	Wheat	plastid	81.85	60.93
TraesCS3B01G319600.1	Wheat	plastid	81.85	60.93
TraesCS3D01G285500.2	Wheat	plastid	81.85	60.93
KRH74537	Soybean	endoplasmic reticulum, plastid	81.19	60.29
Solyc04g039620.2.1	Tomato	plastid	64.36	60.19
CDX97905	Canola	plastid	80.86	59.9
KRH69621	Soybean	plastid	80.53	59.8
AT1G10700.1	Thale cress	plastid	80.53	59.37
CDY19314	Canola	plastid	80.53	59.22
Zm00001d043600_P001	Maize	plastid	54.79	46.37
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	68.65	42.8
GSMUA_Achr11P...	Banana	cytosol, plastid	22.44	20.18
GSMUA_Achr2P12090_001	Banana	cytosol, mitochondrion	21.45	19.58
GSMUA_Achr3P03780_001	Banana	endoplasmic reticulum, vacuole	23.43	18.83

Protein Annotations

Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004749
GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr2G14200_001	EnsemblPlants:GSMUA_Achr2P14200_001	EnsemblPlants:GSMUA_Achr2T14200_001
UniProt:M0S7W1	PFAM:PF00156	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45
SMART:SM01400	SUPFAM:SSF53271	UniParc:UPI000296B4D1	:	:	:

Description

Ribose-phosphate pyrophosphokinase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14200_001]

Coordinates

chr2:-:16045827..16050002

Molecular Weight (calculated)

33936.7 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.043

Length

303 amino acids

Sequence
(BLAST)

001: MRELAERVAL ESDSIYLRSI SWRKFEDGFP NLFIPNAHGI RGQHVAFLAS FSSPGVIFEQ LSVIFALPRL FISSFTLVLP FFPTGSYERM EDEGDVATAF
101: TLARTLSNIP ISRGGPTSLV IFDIHALQER FYFGDSVLPC FESGVPLLKN RLQQLPDSEN ISIAFPDDGA WKRFHKQLQH FPMIICNKVR EGDQRIVRLK
201: EGDPRGRHVV IVDDLVQSGG TLIECQKVLA AHGAERVSAY VTHGIFPNRS WERFNNDNGV GPSNGLSYFW ITDSCPLTVK EVKNRPPFEI LSLAGEIAAA
301: LQI

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.