CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G068700.3	Barley	cytosol	69.78	85.8
GSMUA_Achr2P14200_001	Banana	cytosol	62.41	83.83
Os01t0723600-01	Rice	plastid	75.92	75.55
PGSC0003DMT400035565	Potato	cytosol	22.6	72.44
TraesCS3B01G319600.1	Wheat	plastid	71.74	71.74
TraesCS3D01G285500.2	Wheat	plastid	71.5	71.5
TraesCS3A01G285700.1	Wheat	plastid	71.5	71.5
EES07369	Sorghum	cytosol	57.49	70.48
Zm00001d043600_P001	Maize	plastid	59.95	68.16
Solyc04g039650.2.1	Tomato	plastid	13.02	67.09
VIT_00s0225g00140.t01	Wine grape	plastid	61.67	63.87
KRH74537	Soybean	endoplasmic reticulum, plastid	62.9	62.75
Solyc04g039620.2.1	Tomato	plastid	49.63	62.35
AT1G10700.1	Thale cress	plastid	62.9	62.29
CDX97905	Canola	plastid	61.43	61.12
CDY19314	Canola	plastid	61.67	60.92
KRH69621	Soybean	plastid	60.93	60.78
Bra019905.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus	52.33	43.83
EER90051	Sorghum	plastid	18.67	19.05
EES06216	Sorghum	plastid	17.94	18.34
OQU93498	Sorghum	plastid	16.46	17.01

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	EntrezGene:8059203	UniProt:C5XIE7
EnsemblPlants:EES01390	ProteinID:EES01390	ProteinID:EES01390.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740	PFAM:PF00156	PFAM:PF13793
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF45	InterPro:Pribosyltran_N	SMART:SM01400
EnsemblPlantsGene:SORBI_3003G281200	SUPFAM:SSF53271	unigene:Sbi.8408	UniParc:UPI0001A8484C	RefSeq:XP_002456270.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:61615956..61622310

Molecular Weight (calculated)

44159.0 Da

IEP (calculated)

8.805

GRAVY (calculated)

-0.030

Length

407 amino acids

Sequence
(BLAST)

001: MATAASAFPG AFGVKTPAPA RGLSAHPALT PSPAFARPLP RTPACGRSRA SLHLGGVGAA SSSAAAAGNG TGLHVPPTTA PLAVPKMAGS MKTHKNVLLF
101: YCEEMRDLAR QVVARNDDIE LRSISWRKFP DGYPNLFISN AHNIRGQHVA FLASFSSPSV IFEQLSVIYN LPKLFISSFT LILPFFPTGT SERMEDEGDV
201: ATAFTLARFL SNIPISRGGP SSLVIFDIHA LQERFYFGDS VLPCFESGIP LLKSRLQELP DSHNITIAFP DDGAWKRFYK QLQHFPMVVC NKVREGEQRI
301: VRIKEGDPRG RHVVIVDDLV QSGGTLIECQ KVLAAHGAAK VSAYVTHGIF PNNSWEKFQH DNGEGPEHGL SHFWLTDSCP LTVNAVKGRR PFEILSLAGP
401: IASALQI

Best Arabidopsis Sequence Match ( AT1G10700.1 )
(BLAST)

001: MAAISPANAT TAASLSLPQF SSTSSSLSSS SSPSFLNFKT ASVSNRCIKC GVRSLENHSG HRSLDFLSNG DPISLINPNS SSPITMAAAT SESGSKSSKR
101: VCLFHSDETR DLAERIVAKS DCIELRSINW KKFDDGFPNL FIQNAQGIRG QHVAFLASFS SPAVIFEQLS VIYALPKLFV SSFTLVLPFF PTGTSERMED
201: EGDVATAFTL ARILSNIPTS RGGPTSLVTF DIHALQERFY FGDTILPCFE SGIPLLKSRL QSLPDSDNIS IAFPDDGAWK RFHKQLQHYP TIVCNKVRMG
301: DKRIVRIKEG DAEGRHVVIV DDLVQSGGTL IECQKVLAAH GAAKISAYVT HGIFPRSSWK RFKLDTKGDP AEGLSYFWIT DSCGMTVKEV MNKPPFEVLS
401: LAGSIASALQ V

Arabidopsis Description

PRS3Ribose-phosphate pyrophosphokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93Z66]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.