CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07369

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G42910.1	EES07369	AT2G42910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017833_P001	Maize	cytosol, extracellular, mitochondrion	90.96	92.92
Zm00001d051634_P001	Maize	cytosol	90.66	92.62
Os02t0714600-01	Rice	cytosol, extracellular, nucleus, plasma membrane	87.05	88.92
GSMUA_Achr8P25470_001	Banana	cytosol, golgi, mitochondrion	81.02	84.33
GSMUA_Achr9P27600_001	Banana	cytosol	78.61	81.82
VIT_12s0142g00090.t01	Wine grape	cytosol	76.2	77.61
PGSC0003DMT400054829	Potato	cytosol	73.19	76.9
PGSC0003DMT400044713	Potato	cytosol	72.89	75.62
Solyc10g007760.2.1	Tomato	extracellular, nucleus, plastid	73.19	75.47
Solyc07g056330.2.1	Tomato	cytosol, nucleus	72.59	75.31
AT2G42910.1	Thale cress	cytosol	75.3	74.18
KRH46053	Soybean	cytosol, nucleus	71.39	74.06
KRG98919	Soybean	cytosol	71.39	74.06
Bra000280.1-P	Field mustard	cytosol	75.0	73.67
CDX83511	Canola	cytosol	75.0	72.81
CDY60199	Canola	cytosol	74.4	72.43
CDX79840	Canola	cytosol	74.4	72.01
Bra004730.1-P	Field mustard	cytosol	74.4	72.01
CDY42811	Canola	cytosol	65.96	70.87
TraesCS6D01G259800.1	Wheat	golgi, plastid, unclear	84.64	67.87
TraesCS6B01G308200.1	Wheat	plastid	84.64	67.71
TraesCS6A01G279400.1	Wheat	plastid	84.34	66.99
EES01390	Sorghum	plastid	70.48	57.49
OQU93498	Sorghum	plastid	21.69	18.27
EES06216	Sorghum	plastid	21.69	18.09
EER90051	Sorghum	plastid	21.69	18.05

Protein Annotations

KEGG:00030+2.7.6.1	KEGG:00230+2.7.6.1	Gene3D:3.40.50.2020	MapMan:4.1.1.2.1	EntrezGene:8071787	UniProt:C5XZW8
EnsemblPlants:EES07369	ProteinID:EES07369	ProteinID:EES07369.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004749	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009116	GO:GO:0009165	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
PFAM:PF00156	PFAM:PF13793	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10210	PANTHER:PTHR10210:SF34
InterPro:Pribosyltran_N	InterPro:Rib-P_diPkinase	SMART:SM01400	EnsemblPlantsGene:SORBI_3004G261500	SUPFAM:SSF53271	unigene:Sbi.18845
TIGRFAMs:TIGR01251	UniParc:UPI0001A85BD0	RefSeq:XP_002454393.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:60669475..60672182

Molecular Weight (calculated)

36882.5 Da

IEP (calculated)

7.608

GRAVY (calculated)

0.042

Length

332 amino acids

Sequence
(BLAST)

001: MEVVAAAAAA AKQKTKKHEK HIHLFYCSEC EELALKVAAS SDAIELQSIN WRSFDDGFPN LFINKAHDIR GQHVAFLASF SSPAVIFEQI SVIFALPKLF
101: ISSFTLVLPF FPTGSFERVE EEGDVATAFT LARILSMIPK SRGGPTSVVI YDIHALQERF YFGDDVLPCF ETGIPLLLQR LRQLPDAKNI TIAFPDDGAW
201: KRFHKLLQHF PMIVCNKVRE GDKRIVRIKE GNPEGRHVVI VDDLVQSGGT LRECQKVLAS QGAAKVSAYV THAVFPKRSY ERFMASNSVG PGDQFAYFWI
301: TDSCPHTVKA IGQRPPFEVL SLAGSIADAL QI

Best Arabidopsis Sequence Match ( AT2G42910.1 )
(BLAST)

001: MSENAANNIM ETKICTDAIV SELQKKKVHL FYCLECEELA RNIAAESDHI TLQSINWRSF ADGFPNLFIN NAHDIRGQHV AFLASFSSPA VIFEQISVIY
101: LLPRLFVASF TLVLPFFPTG SFERMEEEGD VATAFTMARI VSNIPISRGG PTSVVIYDIH ALQERFYFAD QVLPLFETGI PLLTKRLQQL PETEKVIVAF
201: PDDGAWKRFH KLLDHYPTVV CTKVREGDKR IVRLKEGNPA GCHVVIVDDL VQSGGTLIEC QKVLAAHGAV KVSAYVTHGV FPKSSWERFT HKKNGLEEAF
301: AYFWITDSCP QTVKAIGNKA PFEVLSLAGS IADALQI

Arabidopsis Description

PRS4Ribose-phosphate pyrophosphokinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q680A5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.