CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89065
KRG97711
KRH04308
KRH14933
KRH24954
KRH31163
KRH50176
KRH52586
KRH57590
KRH61926
KRH71277
KRH73205

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	KRH04308	AT1G32380.1	21798944
AT1G51660.1	KRH57590	AT1G32380.1	21798944
AT1G51660.1	KRH52586	AT1G71230.1	21798944
AT1G51660.1	KRH61926	AT1G71230.1	21798944
AT1G51660.1	KRH50176	AT2G43790.1	19513235
AT1G51660.1	KRH71277	AT2G43790.1	19513235
AT1G51660.1	KRH50176	AT2G43790.1	21798944
AT1G51660.1	KRH71277	AT2G43790.1	21798944
AT1G51660.1	KRG97711	AT3G08530.1	21798944
AT1G51660.1	KRH14933	AT3G08530.1	21798944
AT1G51660.1	KRH31163	AT3G08530.1	21798944
AT1G51660.1	KRH73205	AT3G08530.1	21798944
AT1G51660.1	KRG89065	AT3G45640.1	19513235
AT1G51660.1	KRH24954	AT3G45640.1	19513235
AT1G51660.1	KRG89065	AT3G45640.1	21798944
AT1G51660.1	KRH24954	AT3G45640.1	21798944
AT3G21220.1	KRH50176	AT2G43790.1	19513235
AT3G21220.1	KRH71277	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44646	Soybean	cytosol, plastid	97.44	93.96
CDX87830	Canola	cytosol	44.44	72.56
AT3G21220.1	Thale cress	cytosol, plastid	69.23	69.83
AT1G51660.1	Thale cress	plastid	72.36	69.4
CDY52951	Canola	cytosol	70.09	69.1
CDY46547	Canola	cytosol, plastid	69.52	68.73
Bra014295.1-P	Field mustard	cytosol, plastid	69.23	68.45
CDX82210	Canola	plastid	59.54	68.3
HORVU7Hr1G031720.2	Barley	cytosol	51.85	68.16
Bra001818.1-P	Field mustard	plastid	63.82	67.88
CDY32415	Canola	cytosol, plastid	46.15	67.78
CDY27532	Canola	cytosol, plastid	62.96	67.58
Solyc03g123800.1.1	Tomato	nucleus	68.95	67.41
CDX82209	Canola	plastid	63.25	67.27
GSMUA_Achr9P13590_001	Banana	mitochondrion	45.01	67.23
CDY37306	Canola	cytosol, plastid	63.25	67.07
Bra023894.1-P	Field mustard	cytosol, plastid	63.25	67.07
CDY43920	Canola	cytosol, plastid	64.39	67.06
Bra030430.1-P	Field mustard	cytosol, plastid	64.1	66.77
PGSC0003DMT400023739	Potato	plastid	69.52	65.95
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.25	64.76
Zm00001d045064_P001	Maize	extracellular, plasma membrane	61.82	62.54
KXG19514	Sorghum	plastid	61.82	62.54
TraesCS7B01G059000.1	Wheat	plastid	61.25	62.32
TraesCS7A01G154900.1	Wheat	plastid	61.82	62.18
Os06t0191300-01	Rice	plasma membrane	60.4	61.99
TraesCS7D01G155100.1	Wheat	plastid	61.54	61.89
GSMUA_Achr9P22810_001	Banana	cytosol	22.51	61.72
OQU83236	Sorghum	cytosol	21.94	60.63
Zm00001d018326_P001	Maize	plastid	61.25	60.39
Zm00001d052066_P001	Maize	plastid	61.82	59.62
HORVU5Hr1G067100.2	Barley	cytosol	39.32	59.48
Os02t0787300-01	Rice	plasma membrane	62.39	59.35
VIT_09s0018g01820.t01	Wine grape	plastid	69.8	58.33
OQU85840	Sorghum	plastid	61.54	58.06
CDY32414	Canola	extracellular, plasma membrane	59.83	58.01
TraesCS6D01G328800.1	Wheat	cytosol, plastid	60.68	57.88
TraesCS6B01G379500.1	Wheat	cytosol, plastid	60.97	57.53
Bra001817.1-P	Field mustard	cytosol	60.68	56.2
HORVU0Hr1G038850.2	Barley	cytosol	45.87	54.58
GSMUA_Achr3P05000_001	Banana	plastid	62.96	48.68
KRH39022	Soybean	cytosol, mitochondrion	39.89	43.89
KRH48688	Soybean	mitochondrion	38.75	42.77
Os06t0191500-01	Rice	cytosol, plastid	36.18	41.5
KRH39023	Soybean	mitochondrion	26.21	41.44
KRH37444	Soybean	cytosol	17.38	39.35
KRH74386	Soybean	cytosol, mitochondrion	35.61	37.09
KRH72031	Soybean	cytosol	35.04	34.75
KRH48686	Soybean	mitochondrion	23.65	34.58
KRH33212	Soybean	cytosol	34.76	34.27
KRH19241	Soybean	cytosol, nucleus	33.9	33.43
KRH02666	Soybean	cytosol	33.9	33.43
KRH12458	Soybean	cytosol	33.9	33.15
KRH74639	Soybean	extracellular, plasma membrane	7.69	27.84
KRH25832	Soybean	cytosol	17.95	27.75
KRH46446	Soybean	cytosol	14.24	23.36
KRH56582	Soybean	cytosol	31.91	21.62
KRG93261	Soybean	cytosol	31.62	21.1
KRH23313	Soybean	cytosol	25.93	19.12
KRH44651	Soybean	cytosol	26.21	13.18
KRG93281	Soybean	cytosol	25.07	13.11
KRH56596	Soybean	cytosol	25.07	13.02
KRH47003	Soybean	cytosol	25.07	12.68
KRH22048	Soybean	cytosol	25.07	12.66
KRH75082	Soybean	cytosol	28.21	12.45
KRH55216	Soybean	cytosol	24.79	12.41
KRG88825	Soybean	cytosol	24.5	12.2
KRG90101	Soybean	cytosol	24.5	12.04
KRH70943	Soybean	cytosol	28.49	11.98
KRH34259	Soybean	cytosol	23.65	11.86
KRH27275	Soybean	cytosol, nucleus, plasma membrane	22.79	11.78
KRG92530	Soybean	cytosol	23.93	11.67
KRH17577	Soybean	cytosol	23.93	11.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100786390	MapMan:18.4.2.1	Gene3D:3.30.200.20	UniProt:A0A0R4J3M6	EMBL:ACUP02004132
EnsemblPlantsGene:GLYMA_07G003200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH47006
ProteinID:KRH47006	ProteinID:KRH47006.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00018C6CE6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:250358..252638

Molecular Weight (calculated)

39385.3 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.503

Length

351 amino acids

Sequence
(BLAST)

001: MRPMQLPPPS GSGANPAPTN NSKDRPQRRR KDLTLPLPQR DTNLAVPLPL PPSTASAAAA QQVIPFSELE RLNRIGSGSG GTVYKVVHRT SGRVYALKVI
101: YGHHEESVRR QIHREIQILR DVNDPNVVKC HEMYDQNSEI QVLLEFMDGG SLEGKHIPQE QQLADLSRQI LRGLAYLHRR HIVHRDIKPS NLLINSRKQV
201: KIADFGVGRI LNQTMDPCNS SVGTIAYMSP ERINTDINDG QYDAYAGDIW SFGVSILEFY MGRFPFAVGR QGDWASLMCA ICMSQPPEAP PSASPHFKDF
301: ILRCLQRDPS RRWSASRLLE HPFIAPPLPN HNQTPPNLHQ LLPPPPRPLP S

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.