CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22048	Soybean	cytosol	96.32	94.1
KRG88825	Soybean	cytosol	82.77	79.72
KRH55216	Soybean	cytosol	81.59	79.03
VIT_19s0014g02310.t01	Wine grape	cytosol	73.05	70.25
CDX98536	Canola	cytosol	65.1	65.38
CDX97641	Canola	cytosol	64.65	64.94
Bra027269.1-P	Field mustard	cytosol	64.51	64.51
AT3G15220.1	Thale cress	cytosol	65.54	64.49
Solyc07g062940.2.1	Tomato	cytosol	67.3	63.83
AT1G53165.3	Thale cress	cytosol	63.92	63.08
CDY45937	Canola	cytosol	62.74	62.28
HORVU2Hr1G047960.2	Barley	cytosol	57.0	55.92
TraesCS2A01G233400.1	Wheat	cytosol	57.0	55.92
TraesCS2D01G232200.1	Wheat	cytosol	56.85	55.78
TraesCS2B01G249900.1	Wheat	cytosol	56.85	55.78
CDY25875	Canola	plastid	63.62	55.38
Os07t0507300-01	Rice	cytosol	55.38	54.18
EER99430	Sorghum	cytosol	54.2	53.41
Bra038106.1-P	Field mustard	plastid	63.62	51.92
GSMUA_Achr4P23660_001	Banana	cytosol	56.11	51.28
Zm00001d021584_P003	Maize	cytosol	51.25	50.29
KRH74639	Soybean	extracellular, plasma membrane	5.74	40.21
KRH25832	Soybean	cytosol	13.11	39.21
KRH46446	Soybean	cytosol	11.34	35.98
KRH37444	Soybean	cytosol	7.36	32.26
KRH23313	Soybean	cytosol	19.29	27.52
KRH39022	Soybean	cytosol, mitochondrion	12.37	26.33
KRH48688	Soybean	mitochondrion	12.22	26.1
KRH19241	Soybean	cytosol, nucleus	13.4	25.56
KRH02666	Soybean	cytosol	13.4	25.56
KRH72031	Soybean	cytosol	12.81	24.58
KRH33212	Soybean	cytosol	12.81	24.44
KRH12458	Soybean	cytosol	12.67	23.96
KRH34259	Soybean	cytosol	23.71	23.0
KRH39023	Soybean	mitochondrion	7.51	22.97
KRG93281	Soybean	cytosol	22.68	22.95
KRH75082	Soybean	cytosol	26.8	22.89
KRH47006	Soybean	cytosol, plastid	11.78	22.79
KRH56596	Soybean	cytosol	22.53	22.63
KRG90101	Soybean	cytosol	23.71	22.55
KRG92530	Soybean	cytosol	23.56	22.22
KRH74386	Soybean	cytosol, mitochondrion	10.9	21.96
KRH44646	Soybean	cytosol, plastid	11.63	21.7
KRH70943	Soybean	cytosol	26.51	21.56
KRH17577	Soybean	cytosol	22.83	21.32
KRH48686	Soybean	mitochondrion	7.51	21.25
KRH44651	Soybean	cytosol	21.35	20.77
KRH47003	Soybean	cytosol	21.06	20.61
KRH56582	Soybean	cytosol	14.58	19.11
KRG93261	Soybean	cytosol	14.73	19.01

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100815042	MapMan:18.4.2.3	Gene3D:3.30.200.20	EMBL:ACUP02007795	ncoils:Coil
EnsemblPlantsGene:GLYMA_12G226300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165
GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	UniProt:I1LV29	InterPro:IPR000719
EnsemblPlants:KRH27275	ProteinID:KRH27275	ProteinID:KRH27275.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011
PANTHER:PTHR24361	PANTHER:PTHR24361:SF633	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	UniParc:UPI000233CE87
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:38601503..38609865

Molecular Weight (calculated)

75483.6 Da

IEP (calculated)

7.274

GRAVY (calculated)

-0.713

Length

679 amino acids

Sequence
(BLAST)

001: MGNELFVSLL FNLISRFDRE LNKLVAIKVI DLEESEDEID DIQKEISVLS QCRCPYITEY YGSYLNQTKL WIIMEYMAGG SVADLIQSGP PLDEMSIACI
101: LRDLLHAVDY LHSEGKIHRD IKAANILLSE NGDVKVADFG VSAQLTRTIS RRKTFVGTPF WMAPEVIQNT DGYNEKADIW SLGITAIEMA KGEPPLADLH
201: PMRVLFIIPR ENPPQLDDHF SRPLKEFVSL CLKKVPAERP SAKELLKDRF IRNARKSSKL SERIRERPKY QIKEDEETPR NGPSGMGEAS GTVKVARDLR
301: GEENNRPSDQ GKTLKSAGWD FSIGGSQGTG TFRNVSRPPQ FRDKITEVSH NQLTQRKAPQ SGYQGGSVNR SALNESLESS FGRDLRVPHH DEHLDNHLED
401: DELSGNGSGT VVIRSPKGSR SSAFRDQSSQ SSSSYASFED ASSSGTVVLR GQHDESDSPQ TPRSRLGLND RNSNASMEDS AANLAEAKAA ILRKSNAREK
501: LARGKINNDR QESKRDQKAS SSDSSRPHGE YDAHKGMLRS HHASDGEESA KIMSSSVPLS VLLIPSLKEA IADDPELVRA VINSLINMEG TKPKSCDVFV
601: KKLLQRLASS KEDSLKDLQG LADQLFSKTK SAQETRNAEA DNRKKQQNKE HNSNSNLSPL ARFLLSRWQG QTSRDLNPS

Best Arabidopsis Sequence Match ( AT1G53165.1 )
(BLAST)

001: MDDVAGLQEA AGTRFSQFEL IGRGSFGDVY KAFDTELNKD VAIKVIDLEE SEDEIEDIQK EISVLSQCRC PYITEYYGSY LHQTKLWIIM EYMAGGSVAD
101: LLQPGNPLDE ISIACITRDL LHAVEYLHAE GKIHRDIKAA NILLSENGDV KVADFGVSAQ LTRTISRRKT FVGTPFWMAP EVIQNSEGYN EKADIWSLGI
201: TMIEMAKGEP PLADLHPMRV LFIIPRESPP QLDEHFSRPL KEFVSFCLKK APAERPNAKE LLKHRFIKNA RKSPKLLERI RERPKYQVKE DEEIPTNGPK
301: APAESSGTVR VAKDERGQGT SGTSFQVKTV RNAGWDFSIG GSQGAGTVRA LKPPQARERR QEVNSNQTSQ KTSRTSGSQL SSTFGVPEIS EGGFNKRDSY
401: QNDYQEEDDS SGSGTVVIRS PRSSQSSSMF RDQSSGSTRY TSFDDASTSG TVVVRGQNDD SGSPRTPRSR LGLQERSSSA SEDSISNLAE AKLALEAGFR
501: RGNARERLGN GKVNKRREQA TDNSDYLRNS RDHSDKQRPV MRSQQVSDDE EDDSKLASLS ASLSLLLLPS LKEAVGGDDS KGTIGHRVSR SLVKMEREKP
601: GSSEAFIAKL IEQLGSTKEV SVKEVQDMAI RVFAKTMNND AENKRKQASK EFSSNANFSP LARFLFSRWL GQTSRDLNQS

Arabidopsis Description

ATMAP4K ALPHA1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HPR9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.