CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02666	Soybean	cytosol	96.63	96.63
KRH37444	Soybean	cytosol	34.55	79.35
KRH12458	Soybean	cytosol	77.81	77.16
VIT_11s0016g01770.t01	Wine grape	cytosol, nucleus, plasma membrane	74.44	74.86
PGSC0003DMT400000744	Potato	cytosol	73.6	73.39
Solyc12g009020.1.1	Tomato	cytosol	73.31	73.11
GSMUA_Achr7P09660_001	Banana	cytosol	68.82	70.0
TraesCS4A01G396700.2	Wheat	cytosol	58.15	69.7
GSMUA_Achr10P...	Banana	cytosol	67.42	68.77
CDY43527	Canola	cytosol	69.94	68.41
CDX68588	Canola	cytosol	69.66	68.13
Bra011137.1-P	Field mustard	cytosol	69.66	68.13
TraesCS7A01G096800.1	Wheat	cytosol	66.85	67.81
TraesCS7D01G092900.1	Wheat	cytosol	66.29	67.62
OQU75818	Sorghum	cytosol	65.73	67.05
Os06t0147800-01	Rice	cytosol	66.01	66.76
AT4G29810.2	Thale cress	cytosol	68.54	65.59
AT4G26070.2	Thale cress	cytosol	64.04	64.41
Zm00001d045359_P002	Maize	cytosol	64.04	64.04
CDX92751	Canola	cytosol	62.64	63.17
Bra019122.1-P	Field mustard	cytosol	62.92	63.1
CDY42757	Canola	cytosol	62.64	62.82
KRH72031	Soybean	cytosol	58.43	58.76
KRH33212	Soybean	cytosol	58.71	58.71
Os11t0226100-00	Rice	cytosol	32.58	53.95
GSMUA_Achr10P...	Banana	plastid	64.04	53.9
KRH39023	Soybean	mitochondrion	23.6	37.84
KRH39022	Soybean	cytosol, mitochondrion	32.58	36.36
KRH74639	Soybean	extracellular, plasma membrane	9.83	36.08
KRH48688	Soybean	mitochondrion	31.18	34.91
KRH47006	Soybean	cytosol, plastid	33.43	33.9
KRH44646	Soybean	cytosol, plastid	33.15	32.42
KRH74386	Soybean	cytosol, mitochondrion	30.34	32.05
KRH48686	Soybean	mitochondrion	21.35	31.67
KRH25832	Soybean	cytosol	17.13	26.87
KRH56582	Soybean	cytosol	38.2	26.25
KRG93261	Soybean	cytosol	37.92	25.67
HORVU6Hr1G013290.31	Barley	cytosol	62.92	24.24
KRH46446	Soybean	cytosol	13.76	22.9
KRH23313	Soybean	cytosol	22.47	16.81
KRG88825	Soybean	cytosol	28.09	14.18
KRH55216	Soybean	cytosol	27.81	14.12
KRG93281	Soybean	cytosol	26.4	14.01
KRH56596	Soybean	cytosol	26.4	13.91
KRH44651	Soybean	cytosol	27.25	13.9
KRH47003	Soybean	cytosol	26.69	13.69
KRH22048	Soybean	cytosol	26.4	13.53
KRH27275	Soybean	cytosol, nucleus, plasma membrane	25.56	13.4
KRH34259	Soybean	cytosol	25.56	13.0
KRH75082	Soybean	cytosol	28.37	12.7
KRH17577	Soybean	cytosol	25.84	12.65
KRG90101	Soybean	cytosol	25.0	12.46
KRG92530	Soybean	cytosol	25.0	12.36
KRH70943	Soybean	cytosol	28.93	12.34

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100789734	MapMan:13.4.4.1.3	MapMan:18.4.2.1	Gene3D:3.30.200.20	UniProt:A0A0R4J4Q5
EMBL:ACUP02008170	EnsemblPlantsGene:GLYMA_13G106900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154
GO:GO:0007165	GO:GO:0007346	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	InterPro:IPR000719
EnsemblPlants:KRH19241	ProteinID:KRH19241	ProteinID:KRH19241.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF616	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001B63CFB	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:22119136..22124250

Molecular Weight (calculated)

39699.7 Da

IEP (calculated)

5.089

GRAVY (calculated)

-0.135

Length

356 amino acids

Sequence
(BLAST)

001: MKKGNLGLGL KLSVPVSDQS NFARFLTESG TFKDGDLLVN RDGVRIVSQN DVEAPPPIKP TDNQLTLADI DVIKVVGKGN GGVVQLVQHK WTSQFFALKV
101: IQMNIEESMR KQIAQELKIN QQAQCPYVVV CYQSFYENGV ISIILEYMDG GSLADLLKKV KTIPEDYLAA ICKQVLKGLV YLHHEKHIIH RDLKPSNLLI
201: NHIGEVKITD FGVSAIMEST SGQANTFIGT YNYMSPERIN GSQRGYNYKS DIWSLGLILL ECALGRFPYA PPDQSETWES IFELIETIVD KPPPIPPSEQ
301: FSTEFCSFIS ACLQKDPKDR LSAQELMAHP FVNMYDDLEV DLSAYFSNAG SPLATL

Best Arabidopsis Sequence Match ( AT4G29810.1 )
(BLAST)

001: MKKGGFSNNL KLAIPVAGEQ SITKFLTQSG TFKDGDLRVN KDGVRIISQL EPEVLSPIKP ADDQLSLSDL DMVKVIGKGS SGVVQLVQHK WTGQFFALKV
101: IQLNIDEAIR KAIAQELKIN QSSQCPNLVT SYQSFYDNGA ISLILEYMDG GSLADFLKSV KAIPDSYLSA IFRQVLQGLI YLHHDRHIIH RDLKPSNLLI
201: NHRGEVKITD FGVSTVMTNT AGLANTFVGT YNYMSPERIV GNKYGNKSDI WSLGLVVLEC ATGKFPYAPP NQEETWTSVF ELMEAIVDQP PPALPSGNFS
301: PELSSFISTC LQKDPNSRSS AKELMEHPFL NKYDYSGINL ASYFTDAGSP LATLGNLSGT FSV

Arabidopsis Description

ATMKK2MAP kinase kinase 2 [Source:TAIR;Acc:AT4G29810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.