CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89065
KRG97711
KRH04308
KRH14933
KRH24954
KRH31163
KRH50176
KRH52586
KRH57590
KRH61926
KRH71277
KRH73205

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51660.1	KRH04308	AT1G32380.1	21798944
AT1G51660.1	KRH57590	AT1G32380.1	21798944
AT1G51660.1	KRH52586	AT1G71230.1	21798944
AT1G51660.1	KRH61926	AT1G71230.1	21798944
AT1G51660.1	KRH50176	AT2G43790.1	19513235
AT1G51660.1	KRH71277	AT2G43790.1	19513235
AT1G51660.1	KRH50176	AT2G43790.1	21798944
AT1G51660.1	KRH71277	AT2G43790.1	21798944
AT1G51660.1	KRG97711	AT3G08530.1	21798944
AT1G51660.1	KRH14933	AT3G08530.1	21798944
AT1G51660.1	KRH31163	AT3G08530.1	21798944
AT1G51660.1	KRH73205	AT3G08530.1	21798944
AT1G51660.1	KRG89065	AT3G45640.1	19513235
AT1G51660.1	KRH24954	AT3G45640.1	19513235
AT1G51660.1	KRG89065	AT3G45640.1	21798944
AT1G51660.1	KRH24954	AT3G45640.1	21798944
AT3G21220.1	KRH50176	AT2G43790.1	19513235
AT3G21220.1	KRH71277	AT2G43790.1	19513235

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47006	Soybean	cytosol, plastid	93.96	97.44
CDX87830	Canola	cytosol	42.86	72.56
AT1G51660.1	Thale cress	plastid	70.05	69.67
AT3G21220.1	Thale cress	cytosol, plastid	66.48	69.54
CDY52951	Canola	cytosol	67.86	69.38
CDY27532	Canola	cytosol, plastid	61.81	68.81
CDY46547	Canola	cytosol, plastid	67.03	68.73
Bra014295.1-P	Field mustard	cytosol, plastid	66.76	68.45
CDX82210	Canola	plastid	57.42	68.3
Bra023894.1-P	Field mustard	cytosol, plastid	62.09	68.28
CDY37306	Canola	cytosol, plastid	62.09	68.28
CDY32415	Canola	cytosol, plastid	44.78	68.2
Bra001818.1-P	Field mustard	plastid	61.81	68.18
HORVU7Hr1G031720.2	Barley	cytosol	49.73	67.79
CDX82209	Canola	plastid	61.26	67.58
Solyc03g123800.1.1	Tomato	nucleus	66.48	67.41
GSMUA_Achr9P13590_001	Banana	mitochondrion	43.13	66.81
CDY43920	Canola	cytosol, plastid	61.54	66.47
PGSC0003DMT400023739	Potato	plastid	67.31	66.22
Bra030430.1-P	Field mustard	cytosol, plastid	61.26	66.17
GSMUA_Achr4P05870_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.07	64.76
TraesCS7B01G059000.1	Wheat	plastid	59.07	62.32
Os06t0191300-01	Rice	plasma membrane	58.52	62.28
Zm00001d045064_P001	Maize	extracellular, plasma membrane	59.34	62.25
KXG19514	Sorghum	plastid	59.34	62.25
TraesCS7A01G154900.1	Wheat	plastid	59.62	62.18
TraesCS7D01G155100.1	Wheat	plastid	59.34	61.89
GSMUA_Achr9P22810_001	Banana	cytosol	21.7	61.72
OQU83236	Sorghum	cytosol	21.15	60.63
Zm00001d018326_P001	Maize	plastid	59.07	60.39
Os02t0787300-01	Rice	plasma membrane	60.16	59.35
Zm00001d052066_P001	Maize	plastid	59.07	59.07
HORVU5Hr1G067100.2	Barley	cytosol	37.64	59.05
VIT_09s0018g01820.t01	Wine grape	plastid	67.31	58.33
OQU85840	Sorghum	plastid	59.34	58.06
TraesCS6D01G328800.1	Wheat	cytosol, plastid	58.52	57.88
TraesCS6B01G379500.1	Wheat	cytosol, plastid	59.07	57.8
CDY32414	Canola	extracellular, plasma membrane	57.42	57.73
Bra001817.1-P	Field mustard	cytosol	58.24	55.94
HORVU0Hr1G038850.2	Barley	cytosol	43.96	54.24
GSMUA_Achr3P05000_001	Banana	plastid	60.99	48.9
KRH39022	Soybean	cytosol, mitochondrion	38.46	43.89
KRH48688	Soybean	mitochondrion	37.36	42.77
Os06t0191500-01	Rice	cytosol, plastid	35.16	41.83
KRH39023	Soybean	mitochondrion	24.73	40.54
KRH37444	Soybean	cytosol	16.76	39.35
KRH74386	Soybean	cytosol, mitochondrion	34.07	36.8
KRH48686	Soybean	mitochondrion	23.08	35.0
KRH72031	Soybean	cytosol	33.52	34.46
KRH33212	Soybean	cytosol	33.24	33.99
KRH19241	Soybean	cytosol, nucleus	32.42	33.15
KRH02666	Soybean	cytosol	32.42	33.15
KRH12458	Soybean	cytosol	32.42	32.87
KRH74639	Soybean	extracellular, plasma membrane	7.42	27.84
KRH25832	Soybean	cytosol	17.03	27.31
KRH46446	Soybean	cytosol	13.46	22.9
KRH56582	Soybean	cytosol	30.77	21.62
KRG93261	Soybean	cytosol	30.49	21.1
KRH23313	Soybean	cytosol	24.73	18.91
KRH44651	Soybean	cytosol	25.27	13.18
KRG93281	Soybean	cytosol	24.18	13.11
KRH56596	Soybean	cytosol	24.18	13.02
KRH47003	Soybean	cytosol	24.18	12.68
KRH22048	Soybean	cytosol	23.9	12.52
KRH55216	Soybean	cytosol	23.63	12.27
KRH75082	Soybean	cytosol	26.65	12.2
KRG88825	Soybean	cytosol	23.35	12.06
KRG90101	Soybean	cytosol	23.63	12.04
KRH70943	Soybean	cytosol	26.92	11.74
KRH34259	Soybean	cytosol	22.53	11.71
KRH27275	Soybean	cytosol, nucleus, plasma membrane	21.7	11.63
KRH17577	Soybean	cytosol	23.08	11.55
KRG92530	Soybean	cytosol	22.8	11.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100818488	MapMan:18.4.2.1	Gene3D:3.30.200.20	EMBL:ACUP02004946	EnsemblPlantsGene:GLYMA_08G223400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0007346
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0023014	GO:GO:0031098	GO:GO:0032147	UniProt:I1KVS8	InterPro:IPR000719	EnsemblPlants:KRH44646
ProteinID:KRH44646	ProteinID:KRH44646.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24361	PANTHER:PTHR24361:SF319	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002339279	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:+:18126432..18128358

Molecular Weight (calculated)

40601.6 Da

IEP (calculated)

9.363

GRAVY (calculated)

-0.504

Length

364 amino acids

Sequence
(BLAST)

001: MRPMQLPPPS ASGANPAPAT TNNNNKEQRP QRRRKDLTLP LPQRDTNLAV PLPLPPSTAP AAAASGGASQ QAAQQVIPFS ELERLNRIGS GSGGTVYKVV
101: HRTSGRVYAL KVIYGHHEES VRRQIHREIQ ILRDVDDANV VKCHEMYDQN SEIQVLLEFM DGGSLEGKHI TQEQQLADLS RQILRGLAYL HRRHIVHRDI
201: KPSNLLINSR KQVKIADFGV GRILNQTMDP CNSSVGTIAY MSPERINTDI NDGQYDAYAG DIWSFGVSIL EFYMGRFPFA VGRQGDWASL MCAICMSQPP
301: EAPPSASPHF KDFILRCLQR DPSRRWSASR LLEHPFIAPP LPNHNQTPPN LHQLLPPPPR PLPS

Best Arabidopsis Sequence Match ( AT1G51660.1 )
(BLAST)

001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT

Arabidopsis Description

MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.