Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G379500.1 | Wheat | cytosol, plastid | 98.64 | 97.58 |
| Os02t0787300-01 | Rice | plasma membrane | 86.96 | 86.72 |
| Zm00001d018326_P001 | Maize | plastid | 80.98 | 83.71 |
| OQU85840 | Sorghum | plastid | 82.61 | 81.72 |
| TraesCS7D01G155100.1 | Wheat | plastid | 75.54 | 79.66 |
| Zm00001d052066_P001 | Maize | plastid | 78.53 | 79.4 |
| HORVU0Hr1G038850.2 | Barley | cytosol | 61.41 | 76.61 |
| GSMUA_Achr9P13590_001 | Banana | mitochondrion | 46.47 | 72.77 |
| CDY32415 | Canola | cytosol, plastid | 43.75 | 67.36 |
| CDY27532 | Canola | cytosol, plastid | 57.61 | 64.83 |
| Bra023894.1-P | Field mustard | cytosol, plastid | 57.88 | 64.35 |
| CDY37306 | Canola | cytosol, plastid | 57.88 | 64.35 |
| Bra001818.1-P | Field mustard | plastid | 57.61 | 64.24 |
| CDX82209 | Canola | plastid | 57.07 | 63.64 |
| CDX87830 | Canola | cytosol | 36.96 | 63.26 |
| AT3G21220.1 | Thale cress | cytosol, plastid | 58.97 | 62.36 |
| CDX82210 | Canola | plastid | 51.36 | 61.76 |
| CDY46547 | Canola | cytosol, plastid | 59.24 | 61.41 |
| Bra014295.1-P | Field mustard | cytosol, plastid | 58.97 | 61.13 |
| KRH47006 | Soybean | cytosol, plastid | 57.88 | 60.68 |
| CDY43920 | Canola | cytosol, plastid | 55.43 | 60.53 |
| CDY52951 | Canola | cytosol | 58.42 | 60.39 |
| AT1G51660.1 | Thale cress | plastid | 60.05 | 60.38 |
| Bra030430.1-P | Field mustard | cytosol, plastid | 55.16 | 60.24 |
| Solyc03g123800.1.1 | Tomato | nucleus | 57.88 | 59.33 |
| PGSC0003DMT400023739 | Potato | plastid | 59.24 | 58.92 |
| KRH44646 | Soybean | cytosol, plastid | 57.88 | 58.52 |
| CDY32414 | Canola | extracellular, plasma membrane | 55.16 | 56.08 |
| GSMUA_Achr3P05000_001 | Banana | plastid | 66.58 | 53.96 |
| VIT_09s0018g01820.t01 | Wine grape | plastid | 59.78 | 52.38 |
| Bra001817.1-P | Field mustard | cytosol | 53.8 | 52.24 |
| TraesCS4D01G239400.1 | Wheat | mitochondrion | 37.77 | 41.87 |
| TraesCS4D01G048500.1 | Wheat | mitochondrion | 37.23 | 39.94 |
| TraesCS4D01G048800.1 | Wheat | cytosol, mitochondrion | 35.87 | 39.52 |
| TraesCS4D01G049100.1 | Wheat | cytosol, mitochondrion | 36.14 | 39.35 |
| TraesCS4D01G047900.1 | Wheat | mitochondrion | 36.41 | 38.4 |
| TraesCS4D01G312300.3 | Wheat | cytosol | 33.97 | 35.21 |
| TraesCS7D01G092900.1 | Wheat | cytosol | 30.98 | 32.66 |
| TraesCS1D01G399400.1 | Wheat | cytosol, mitochondrion, plastid, vacuole | 29.62 | 31.14 |
| TraesCS5D01G549600.1 | Wheat | cytosol | 30.98 | 21.8 |
| TraesCS5D01G130900.2 | Wheat | cytosol | 29.62 | 20.76 |
| TraesCS5D01G203600.1 | Wheat | cytosol | 22.28 | 15.83 |
| TraesCS6D01G139200.1 | Wheat | cytosol | 20.11 | 14.54 |
| TraesCS2D01G232200.1 | Wheat | cytosol | 23.64 | 12.57 |
| TraesCS5D01G402300.1 | Wheat | cytosol | 26.9 | 12.04 |
| TraesCS7D01G232400.1 | Wheat | cytosol | 22.83 | 11.85 |
| TraesCS6D01G335800.1 | Wheat | cytosol | 21.74 | 11.51 |
| TraesCS1D01G185000.2 | Wheat | cytosol, mitochondrion, nucleus | 22.55 | 11.35 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.2.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24361 | PANTHER:PTHR24361:SF469 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS6D01G328800 | EnsemblPlants:TraesCS6D01G328800.1 | TIGR:cd06623 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:+:433407950..433409450
Molecular Weight (calculated)
39624.6 Da
IEP (calculated)
9.248
GRAVY (calculated)
-0.323
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPGGPPNAR PGLQQQQPGT PGRARRRPDL TLPLPQRDLT SLAVPLPLPP PPSSAPSSTS SSGSGGASSM PMPMSMTPPN SAGSTPPAPP PLGELERVRR
101: VGSGAGGTVW LVRHAPTGRA YALKVLYGHH DEAVRRQITR EIAILRTAEH PSIVRCHGMY EQAGELQILL EYMDGGSLDG RRIASESFLA DVARQVLSGI
201: AYLHRRHIVH RDIKPSNLLI DCARRVKIAD FGVGRILNQT MDPCNSSVGT IAYMSPERIN TDLNDGNYNG YAGDIWSFGL SILEFYLGRF PLGENLGKQG
301: DWAALMCAIC YSESPAAPPT ASPELRSFIS CCLQKNPAKR PSAAQLLQHR FIASPPQQQP QALAAPPC
101: VGSGAGGTVW LVRHAPTGRA YALKVLYGHH DEAVRRQITR EIAILRTAEH PSIVRCHGMY EQAGELQILL EYMDGGSLDG RRIASESFLA DVARQVLSGI
201: AYLHRRHIVH RDIKPSNLLI DCARRVKIAD FGVGRILNQT MDPCNSSVGT IAYMSPERIN TDLNDGNYNG YAGDIWSFGL SILEFYLGRF PLGENLGKQG
301: DWAALMCAIC YSESPAAPPT ASPELRSFIS CCLQKNPAKR PSAAQLLQHR FIASPPQQQP QALAAPPC
001: MRPIQSPPGV SVPVKSRPRR RPDLTLPLPQ RDVSLAVPLP LPPTSGGSGG SSGSAPSSGG SASSTNTNSS IEAKNYSDLV RGNRIGSGAG GTVYKVIHRP
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT
101: SSRLYALKVI YGNHEETVRR QICREIEILR DVNHPNVVKC HEMFDQNGEI QVLLEFMDKG SLEGAHVWKE QQLADLSRQI LSGLAYLHSR HIVHRDIKPS
201: NLLINSAKNV KIADFGVSRI LAQTMDPCNS SVGTIAYMSP ERINTDLNQG KYDGYAGDIW SLGVSILEFY LGRFPFPVSR QGDWASLMCA ICMSQPPEAP
301: ATASPEFRHF ISCCLQREPG KRRSAMQLLQ HPFILRASPS QNRSPQNLHQ LLPPPRPLSS SSSPTT
Arabidopsis Description
MKK4MKK4 [Source:UniProtKB/TrEMBL;Acc:A0A178WCC0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.