Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G343700.1 | Wheat | cytosol | 96.79 | 95.88 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 96.08 | 94.72 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 87.28 | 85.95 |
| Os02t0258300-01 | Rice | nucleus | 68.97 | 68.88 |
| KXG29961 | Sorghum | nucleus | 66.11 | 64.35 |
| Zm00001d016081_P002 | Maize | nucleus | 64.21 | 63.38 |
| Zm00001d053382_P002 | Maize | nucleus | 61.71 | 62.91 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 52.56 | 53.38 |
| Bra037384.1-P | Field mustard | nucleus | 11.41 | 41.92 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 37.22 | 41.29 |
| KRG99688 | Soybean | cytosol | 3.33 | 41.18 |
| GSMUA_Achr10P... | Banana | nucleus | 37.34 | 40.05 |
| GSMUA_Achr10P... | Banana | cytosol | 36.39 | 39.43 |
| GSMUA_Achr10P... | Banana | nucleus | 33.53 | 37.55 |
| CDX79176 | Canola | cytosol | 4.99 | 37.17 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 33.29 | 32.98 |
| CDY42041 | Canola | cytosol | 24.85 | 32.35 |
| CDX71720 | Canola | cytosol | 28.06 | 31.89 |
| Bra004541.1-P | Field mustard | nucleus | 25.09 | 31.45 |
| CDY11374 | Canola | cytosol | 27.59 | 31.31 |
| CDX80013 | Canola | nucleus | 24.61 | 31.13 |
| Bra007625.1-P | Field mustard | cytosol | 27.35 | 31.04 |
| AT3G61670.1 | Thale cress | nucleus | 28.18 | 30.0 |
| CDY11373 | Canola | cytosol | 26.04 | 29.88 |
| AT2G46380.1 | Thale cress | nucleus | 26.75 | 29.3 |
| Bra033264.1-P | Field mustard | nucleus | 19.5 | 28.23 |
| CDY15177 | Canola | nucleus | 18.55 | 28.01 |
| CDX90032 | Canola | nucleus | 18.55 | 27.86 |
| KRG97141 | Soybean | nucleus | 30.08 | 27.77 |
| KRH68892 | Soybean | nucleus | 29.85 | 27.77 |
| CDY48504 | Canola | nucleus | 18.19 | 27.18 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.21 | 27.14 |
| CDX91876 | Canola | nucleus | 18.67 | 26.88 |
| KRH06502 | Soybean | nucleus | 28.42 | 26.79 |
| CDY67475 | Canola | nucleus | 18.55 | 26.4 |
| KRH47938 | Soybean | nucleus | 27.94 | 26.29 |
| Bra000943.1-P | Field mustard | nucleus | 18.67 | 26.17 |
| Solyc08g082040.2.1 | Tomato | nucleus | 29.25 | 26.03 |
| PGSC0003DMT400032053 | Potato | nucleus | 29.25 | 26.0 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.96 | 25.1 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.78 | 25.03 |
| CDY07174 | Canola | nucleus | 18.67 | 24.69 |
| AT1G01440.1 | Thale cress | nucleus | 19.02 | 24.1 |
| AT4G01090.1 | Thale cress | nucleus | 19.74 | 23.25 |
| TraesCS1B01G459600.2 | Wheat | plastid | 21.64 | 23.16 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 21.28 | 22.49 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G247600.1 | EnsemblPlantsGene:TraesCS7B01G247600 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:457785142..457789057
Molecular Weight (calculated)
92937.1 Da
IEP (calculated)
7.229
GRAVY (calculated)
-0.680
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSEGSGAS CPAAAAAAAE QQVRVVRCPK CEKFLPELPN YSVYVCGGCG ATLQAKKHSA PETTCLDKTD VVHVKYLEVL ESSPEKKEPV SEANFETISE
101: ENSQRVQATP EERLVTQRMM PEHRDSRCSS GDDQIPREPS TLMFRATLRD DSTEIREAKY RRIRNEEKGD VKQPVRPSDR SHISVVDTIP PNAYHGEHQM
201: KSSFGDANGS QCADGRNMDG PSSVSGLEKD RAELLRMLDE LRDQVQRSCE ITEKPSVGAS TSRVVDASSS YSPHELLSRL RNGSQCSPSL SGQNPDVLHA
301: YASVPTHQDL HGYREPDTHM GAPCYPVGQY PWRNCDSYFF GQHNHDPLVS YHHGGFYHQP ACSCLHCHHR EFLPVQGAPM GFNHHRVPYP GAYPVNGSVM
401: FGMQNKNSRG INASMHRGHM RGNLSKKPPQ TCEPIACGAP FTICYNCYEV LQLPKKCPLP GKDEYKLRCG SCSHVIMVKL DGSRLDVSAP SPISHMSAAS
501: RNNSSDVQGS NAYSAADERL LPLYSFSAGS HCSRERDLHS DSSDTEKVQG ISSSSSIFED ENNPARSNSQ RGTPRSSDLP VEAQVVSRVP SLPLQHHFAH
601: SPSERVVNGS GKGSRSTRSE HEKTVLTETC RHNTIKDVRV VSVMSLSDDE YEDPDCSQDP CVGTQHVDRL TVTKTGDSFF TNLMKKSFKI NNGMGNGRAK
701: VFINGYPISD RAVKKAEKIA GPIYPGEYWY DYRAGFWGVM GQSCLGMIPP YIPQLNYPMP KNCAGGNTGI FINGRELHQK DFDLLVGRGL SESPDRSYKV
801: EMSGKVYDEV SGEELYCLGK LAPTVEKMKR GFGMRPPRTI H
101: ENSQRVQATP EERLVTQRMM PEHRDSRCSS GDDQIPREPS TLMFRATLRD DSTEIREAKY RRIRNEEKGD VKQPVRPSDR SHISVVDTIP PNAYHGEHQM
201: KSSFGDANGS QCADGRNMDG PSSVSGLEKD RAELLRMLDE LRDQVQRSCE ITEKPSVGAS TSRVVDASSS YSPHELLSRL RNGSQCSPSL SGQNPDVLHA
301: YASVPTHQDL HGYREPDTHM GAPCYPVGQY PWRNCDSYFF GQHNHDPLVS YHHGGFYHQP ACSCLHCHHR EFLPVQGAPM GFNHHRVPYP GAYPVNGSVM
401: FGMQNKNSRG INASMHRGHM RGNLSKKPPQ TCEPIACGAP FTICYNCYEV LQLPKKCPLP GKDEYKLRCG SCSHVIMVKL DGSRLDVSAP SPISHMSAAS
501: RNNSSDVQGS NAYSAADERL LPLYSFSAGS HCSRERDLHS DSSDTEKVQG ISSSSSIFED ENNPARSNSQ RGTPRSSDLP VEAQVVSRVP SLPLQHHFAH
601: SPSERVVNGS GKGSRSTRSE HEKTVLTETC RHNTIKDVRV VSVMSLSDDE YEDPDCSQDP CVGTQHVDRL TVTKTGDSFF TNLMKKSFKI NNGMGNGRAK
701: VFINGYPISD RAVKKAEKIA GPIYPGEYWY DYRAGFWGVM GQSCLGMIPP YIPQLNYPMP KNCAGGNTGI FINGRELHQK DFDLLVGRGL SESPDRSYKV
801: EMSGKVYDEV SGEELYCLGK LAPTVEKMKR GFGMRPPRTI H
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.