Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G397400.1 | Wheat | cytosol, nucleus, plastid | 99.54 | 99.54 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 99.54 | 99.54 |
| TraesCS4A01G397500.1 | Wheat | cytosol | 96.35 | 96.35 |
| TraesCS7D01G093600.1 | Wheat | plastid | 91.78 | 68.84 |
| TraesCS7D01G093700.1 | Wheat | plastid | 92.24 | 66.45 |
| HORVU7Hr1G021380.1 | Barley | plastid | 35.16 | 39.29 |
| Bra006562.1-P | Field mustard | cytosol | 12.33 | 38.57 |
| CDY51845 | Canola | cytosol | 12.33 | 38.57 |
| CDY45267 | Canola | nucleus | 32.42 | 34.8 |
| Os03t0818300-01 | Rice | nucleus | 38.36 | 34.01 |
| KRH56367 | Soybean | peroxisome | 33.79 | 33.64 |
| TraesCS5B01G486600.1 | Wheat | nucleus | 37.9 | 33.07 |
| PGSC0003DMT400049364 | Potato | nucleus | 36.07 | 32.92 |
| Solyc10g076690.1.1 | Tomato | nucleus | 36.07 | 32.92 |
| Os07t0233300-01 | Rice | nucleus | 36.53 | 32.79 |
| KRH38049 | Soybean | nucleus | 35.62 | 32.77 |
| KRH65724 | Soybean | nucleus | 35.62 | 32.64 |
| Zm00001d034627_P002 | Maize | nucleus | 36.99 | 32.4 |
| Zm00001d005185_P001 | Maize | nucleus | 35.62 | 32.37 |
| KRH69940 | Soybean | peroxisome | 32.42 | 32.27 |
| Zm00001d044178_P001 | Maize | cytosol | 13.7 | 32.26 |
| KRH00242 | Soybean | nucleus | 35.16 | 32.22 |
| KRH49390 | Soybean | nucleus | 35.16 | 32.22 |
| GSMUA_Achr10P... | Banana | nucleus | 8.22 | 32.14 |
| VIT_13s0067g01000.t01 | Wine grape | nucleus | 35.16 | 31.95 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 35.16 | 31.69 |
| Solyc10g085180.1.1 | Tomato | nucleus | 34.7 | 31.67 |
| PGSC0003DMT400059399 | Potato | nucleus | 34.7 | 31.54 |
| Solyc09g005360.2.1 | Tomato | nucleus | 34.7 | 31.54 |
| PGSC0003DMT400028638 | Potato | nucleus | 34.25 | 31.25 |
| HORVU0Hr1G025310.1 | Barley | plastid | 23.74 | 31.14 |
| Solyc05g032760.2.1 | Tomato | extracellular, nucleus | 13.7 | 30.93 |
| OQU77871 | Sorghum | cytosol | 15.98 | 30.7 |
| KRH23260 | Soybean | nucleus | 34.25 | 30.49 |
| Zm00001d010834_P001 | Maize | nucleus | 35.16 | 30.43 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 34.7 | 30.4 |
| KRH10063 | Soybean | nucleus | 34.25 | 30.24 |
| KRH37475 | Soybean | nucleus | 34.25 | 30.24 |
| Os05t0419100-01 | Rice | nucleus | 35.62 | 30.23 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 35.16 | 29.96 |
| OQU77872 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.59 | 29.91 |
| AT5G26210.1 | Thale cress | nucleus | 34.7 | 29.8 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 34.25 | 29.76 |
| Zm00001d028496_P001 | Maize | cytosol | 13.7 | 29.7 |
| Zm00001d049007_P001 | Maize | cytosol | 15.98 | 29.66 |
| KRH06119 | Soybean | nucleus | 34.25 | 29.64 |
| KRH47546 | Soybean | nucleus | 34.25 | 29.64 |
| Bra016698.1-P | Field mustard | cytosol | 33.79 | 29.6 |
| CDX84026 | Canola | nucleus | 33.79 | 29.6 |
| CDX96851 | Canola | cytosol | 33.79 | 29.6 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 34.7 | 29.57 |
| KRH26115 | Soybean | endoplasmic reticulum, extracellular | 11.87 | 29.55 |
| Solyc12g096040.1.1 | Tomato | nucleus | 34.25 | 29.53 |
| CDY65375 | Canola | nucleus | 32.88 | 29.51 |
| KRH19253 | Soybean | nucleus | 33.79 | 29.48 |
| KRH02655 | Soybean | nucleus | 33.79 | 29.37 |
| CDX81645 | Canola | cytosol | 32.42 | 29.22 |
| CDY53545 | Canola | cytosol | 32.42 | 29.22 |
| Bra026210.1-P | Field mustard | nucleus | 33.33 | 29.2 |
| Bra020107.1-P | Field mustard | cytosol | 33.79 | 29.13 |
| Bra020543.1-P | Field mustard | cytosol, nucleus, plastid | 33.79 | 29.13 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 33.79 | 29.13 |
| CDY70751 | Canola | cytosol | 33.79 | 29.13 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 33.79 | 29.13 |
| Bra026825.1-P | Field mustard | nucleus | 32.42 | 29.1 |
| KRH61563 | Soybean | cytosol | 29.22 | 29.09 |
| Solyc01g102760.2.1 | Tomato | nucleus | 32.88 | 29.03 |
| Zm00001d010241_P002 | Maize | cytosol | 21.46 | 29.01 |
| AT1G14510.1 | Thale cress | nucleus | 33.33 | 28.97 |
| KRH15616 | Soybean | nucleus | 33.79 | 28.91 |
| Zm00001d038208_P001 | Maize | nucleus | 33.79 | 28.91 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 34.7 | 28.9 |
| Bra024817.1-P | Field mustard | nucleus | 32.42 | 28.86 |
| Bra036568.1-P | Field mustard | cytosol | 33.79 | 28.79 |
| CDX87061 | Canola | cytosol | 33.79 | 28.79 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 33.79 | 28.79 |
| CDY19781 | Canola | cytosol | 33.79 | 28.79 |
| PGSC0003DMT400012523 | Potato | nucleus | 33.79 | 28.79 |
| Solyc06g062850.2.1 | Tomato | nucleus | 33.79 | 28.79 |
| Bra034950.1-P | Field mustard | nucleus | 33.33 | 28.74 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 33.33 | 28.74 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 33.33 | 28.74 |
| Bra009887.1-P | Field mustard | nucleus | 34.25 | 28.74 |
| CDX88221 | Canola | nucleus | 34.25 | 28.74 |
| CDY52629 | Canola | nucleus | 34.25 | 28.74 |
| PGSC0003DMT400047018 | Potato | nucleus | 32.42 | 28.63 |
| CDY16540 | Canola | cytosol | 34.25 | 28.63 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 34.25 | 28.52 |
| Solyc01g102750.2.1 | Tomato | nucleus | 32.42 | 28.51 |
| VIT_12s0035g01980.t01 | Wine grape | nucleus | 32.88 | 28.46 |
| AT3G11200.1 | Thale cress | nucleus | 31.96 | 28.46 |
| Solyc07g041190.2.1 | Tomato | nucleus | 31.96 | 28.46 |
| AT3G42790.1 | Thale cress | nucleus | 32.42 | 28.4 |
| Bra034169.1-P | Field mustard | nucleus | 32.42 | 28.4 |
| CDY36305 | Canola | cytosol | 32.42 | 28.4 |
| Os11t0244800-01 | Rice | nucleus | 32.88 | 28.35 |
| PGSC0003DMT400054001 | Potato | nucleus | 31.96 | 28.34 |
| KRH51269 | Soybean | nucleus | 32.42 | 28.29 |
| AT5G05610.1 | Thale cress | nucleus | 31.05 | 28.22 |
| KRH01887 | Soybean | nucleus | 32.42 | 28.17 |
| CDX73886 | Canola | nucleus | 31.51 | 28.16 |
| Solyc06g051420.2.1 | Tomato | nucleus | 31.51 | 28.16 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 32.88 | 28.12 |
| VIT_04s0008g01670.t01 | Wine grape | nucleus | 33.79 | 28.03 |
| VIT_09s0002g01600.t01 | Wine grape | nucleus | 33.33 | 27.97 |
| CDY17594 | Canola | cytosol | 15.07 | 27.97 |
| Bra034860.1-P | Field mustard | nucleus | 31.51 | 27.94 |
| CDY08544 | Canola | nucleus | 31.51 | 27.94 |
| Zm00001d041767_P002 | Maize | nucleus | 33.79 | 27.92 |
| Bra009121.1-P | Field mustard | nucleus | 30.59 | 27.92 |
| CDX70142 | Canola | cytosol | 30.59 | 27.92 |
| Bra017415.1-P | Field mustard | cytosol, nucleus, plastid | 31.05 | 27.87 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 31.05 | 27.87 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 31.05 | 27.87 |
| CDY00726 | Canola | nucleus | 31.05 | 27.76 |
| KRH62601 | Soybean | cytosol | 19.63 | 27.74 |
| Os04t0444900-01 | Rice | nucleus | 32.42 | 27.73 |
| OQU77873 | Sorghum | cytosol | 31.51 | 27.71 |
| CDY01002 | Canola | nucleus | 31.51 | 27.6 |
| Os01t0887700-01 | Rice | nucleus | 34.25 | 27.57 |
| CDX98851 | Canola | nucleus | 30.14 | 27.5 |
| Zm00001d049006_P001 | Maize | plastid | 16.44 | 27.48 |
| CDY03049 | Canola | cytosol | 30.59 | 27.35 |
| AT5G20510.1 | Thale cress | cytosol | 32.42 | 27.31 |
| Zm00001d037537_P001 | Maize | nucleus | 31.96 | 27.13 |
| CDY17593 | Canola | cytosol | 14.61 | 27.12 |
| Zm00001d009466_P001 | Maize | cytosol | 11.87 | 26.8 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 33.33 | 26.74 |
| Os02t0564100-01 | Rice | nucleus | 32.42 | 26.59 |
| Zm00001d012196_P005 | Maize | nucleus | 34.7 | 26.48 |
| Zm00001d036294_P001 | Maize | plastid | 15.53 | 26.36 |
| Os07t0608400-01 | Rice | nucleus | 33.33 | 26.26 |
| Bra002307.1-P | Field mustard | nucleus | 33.79 | 26.24 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 33.33 | 25.89 |
| Zm00001d025504_P001 | Maize | nucleus | 29.22 | 25.81 |
| Bra001393.1-P | Field mustard | nucleus | 29.22 | 25.6 |
| Solyc05g032770.2.1 | Tomato | nucleus | 20.09 | 25.58 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 33.33 | 25.44 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 11.42 | 24.75 |
| PGSC0003DMT400006365 | Potato | nucleus | 31.05 | 24.64 |
| Zm00001d023962_P001 | Maize | nucleus | 34.25 | 24.35 |
| KRH05401 | Soybean | endoplasmic reticulum, nucleus, plastid | 26.94 | 23.79 |
| Solyc03g121930.2.1 | Tomato | nucleus | 29.68 | 23.55 |
| KXG24231 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 28.31 | 22.96 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 29.22 | 22.22 |
| KRH71913 | Soybean | cytosol | 9.59 | 22.11 |
| KXG21847 | Sorghum | cytosol, plastid | 29.22 | 22.07 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 28.31 | 21.91 |
| Zm00001d022110_P002 | Maize | nucleus | 29.68 | 20.63 |
| Os05t0163100-01 | Rice | nucleus | 22.83 | 18.8 |
| Zm00001d025491_P002 | Maize | nucleus | 31.05 | 18.68 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | InterPro:Alfin | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042393 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 |
| PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF65 | SMART:SM00249 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCSU01G252500 |
| EnsemblPlants:TraesCSU01G252500.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
Description
No Description!
Coordinates
chrUn:+:387937293..387938358
Molecular Weight (calculated)
24971.1 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.553
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLYGYPDGS WELTLPEEMV PPGLPVPTRG INRRRDYVNR SDYLTLVAHH SDSWLMGVTF FLSTHLDPNQ RIRLFDMVNE MRTVHDEFYL SYGLSWLSTF
101: ARYNANRESS ALTQENVSNP DVVSITHAEE NVPPAQDSMQ VLSAPNRDSR KPAKDKQKDN EVTDFCGSCN APYHANAFWI GCDGCDQWFH GKCVNITASE
201: AKHIEEYKCP DCIREVIGE
101: ARYNANRESS ALTQENVSNP DVVSITHAEE NVPPAQDSMQ VLSAPNRDSR KPAKDKQKDN EVTDFCGSCN APYHANAFWI GCDGCDQWFH GKCVNITASE
201: AKHIEEYKCP DCIREVIGE
001: MRSGYERFRL LDTLLCVLLR FDFNFWVFVV IEKENLCLYG HPNESWEVNL PAEEVPPELP EPALGINFAR DGMQRKDWLS LVAVHSDCWL LSVSFYFGAR
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
Arabidopsis Description
AL2PHD finger protein ALFIN-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRM4]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.