Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 2
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006562.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY17593 | Canola | cytosol | 75.71 | 44.92 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 47.14 | 32.67 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 91.43 | 24.9 |
| CDY70751 | Canola | cytosol | 88.57 | 24.41 |
| AT5G20510.1 | Thale cress | cytosol | 90.0 | 24.23 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 87.14 | 24.21 |
| CDY16540 | Canola | cytosol | 90.0 | 24.05 |
| CDY45267 | Canola | nucleus | 70.0 | 24.02 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 84.29 | 23.51 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 80.0 | 22.05 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 78.57 | 22.0 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 75.71 | 21.72 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 75.71 | 21.72 |
| CDX88221 | Canola | nucleus | 80.0 | 21.46 |
| CDY52629 | Canola | nucleus | 80.0 | 21.46 |
| CDY19781 | Canola | cytosol | 78.57 | 21.4 |
| CDX87061 | Canola | cytosol | 78.57 | 21.4 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 77.14 | 21.26 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 77.14 | 21.26 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 81.43 | 20.88 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 81.43 | 20.88 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 81.43 | 20.88 |
| CDY03049 | Canola | cytosol | 72.86 | 20.82 |
| CDX84026 | Canola | nucleus | 74.29 | 20.8 |
| CDX96851 | Canola | cytosol | 72.86 | 20.4 |
| Os07t0608400-01 | Rice | nucleus | 78.57 | 19.78 |
| CDY53545 | Canola | cytosol | 68.57 | 19.75 |
| CDX81645 | Canola | cytosol | 68.57 | 19.75 |
| EER97523 | Sorghum | nucleus | 75.71 | 19.7 |
| CDY65375 | Canola | nucleus | 68.57 | 19.67 |
| CDX70142 | Canola | cytosol | 64.29 | 18.75 |
| CDY00726 | Canola | nucleus | 64.29 | 18.37 |
| CDX73886 | Canola | nucleus | 64.29 | 18.37 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 78.57 | 18.15 |
| CDX98851 | Canola | nucleus | 61.43 | 17.92 |
| CDY08544 | Canola | nucleus | 62.86 | 17.81 |
| CDY36305 | Canola | cytosol | 62.86 | 17.6 |
| CDY01002 | Canola | nucleus | 62.86 | 17.6 |
| Zm00001d022110_P002 | Maize | nucleus | 75.71 | 16.83 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 38.57 | 12.33 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 38.57 | 12.33 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 45.71 | 11.11 |
| CDX80967 | Canola | mitochondrion | 5.71 | 2.21 |
| CDY11330 | Canola | mitochondrion | 5.71 | 2.17 |
| KRH71913 | Soybean | cytosol | 1.43 | 1.05 |
| CDY17594 | Canola | cytosol | 1.43 | 0.85 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078ILA6 | UniProt:A0A078ILA6 | EnsemblPlants:CDY51845 | ProteinID:CDY51845 |
| ProteinID:CDY51845.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00004327001 | InterPro:IPR013083 |
| InterPro:IPR019787 | PFAM:PF00628 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 |
| SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0002540046 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
BnaA03g56120DBnaA03g56120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILA6]
Coordinates
chrLK033033:+:48355..48567
Molecular Weight (calculated)
7999.4 Da
IEP (calculated)
5.049
GRAVY (calculated)
-0.544
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MFEEEGLDGD EHGDTLCGAC VDNYASDEFW ICCDMCEKWF HGICVKITPA RAEHIKHYKC PSCSNKRARP
001: MCFEKQNLCL YGFPNEVWEV NLPAEEVPPE LPEPALGINF ARDGMQERNW LSLVAVHSDA WLLSVSFYFG SRFGFDRADR KRLFSMINEV PTVYEVVTGN
101: AEKQTKEMPS SANQNGNRSK SNSKMRGLES KSSKTIHAKD EEEGLELEEG EEEEDEDEDE HGETLCGACG DNYASDEFWI CCDMCEKWFH GECVKITPAR
201: AEHIKHYKCP TCSNKRARP
101: AEKQTKEMPS SANQNGNRSK SNSKMRGLES KSSKTIHAKD EEEGLELEEG EEEEDEDEDE HGETLCGACG DNYASDEFWI CCDMCEKWFH GECVKITPAR
201: AEHIKHYKCP TCSNKRARP
Arabidopsis Description
AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.