Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16540 | Canola | cytosol | 96.11 | 94.27 |
| CDY51845 | Canola | cytosol | 24.9 | 91.43 |
| Bra002307.1-P | Field mustard | nucleus | 97.28 | 88.65 |
| CDY70751 | Canola | cytosol | 86.77 | 87.8 |
| AT5G20510.1 | Thale cress | cytosol | 84.82 | 83.85 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 77.43 | 78.97 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 77.04 | 77.95 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 76.26 | 77.17 |
| CDY17594 | Canola | cytosol | 35.41 | 77.12 |
| KRH71913 | Soybean | cytosol | 28.02 | 75.79 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 72.76 | 74.5 |
| CDY52629 | Canola | nucleus | 74.32 | 73.18 |
| CDX88221 | Canola | nucleus | 73.93 | 72.8 |
| CDX87061 | Canola | cytosol | 71.98 | 71.98 |
| CDY19781 | Canola | cytosol | 71.98 | 71.98 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 68.48 | 70.4 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 68.09 | 68.9 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 63.42 | 66.8 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 63.42 | 66.8 |
| Os07t0608400-01 | Rice | nucleus | 71.98 | 66.55 |
| CDY03049 | Canola | cytosol | 63.42 | 66.53 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 70.43 | 66.3 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 70.43 | 66.3 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 70.43 | 66.3 |
| CDX84026 | Canola | nucleus | 64.2 | 66.0 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 25.68 | 65.35 |
| CDX96851 | Canola | cytosol | 63.42 | 65.2 |
| CDY53545 | Canola | cytosol | 60.7 | 64.2 |
| CDX81645 | Canola | cytosol | 59.92 | 63.37 |
| EER97523 | Sorghum | nucleus | 66.15 | 63.2 |
| CDY17593 | Canola | cytosol | 28.79 | 62.71 |
| CDY36305 | Canola | cytosol | 60.7 | 62.4 |
| CDY08544 | Canola | nucleus | 59.92 | 62.35 |
| CDX73886 | Canola | nucleus | 59.14 | 62.04 |
| CDY00726 | Canola | nucleus | 59.14 | 62.04 |
| CDY01002 | Canola | nucleus | 59.92 | 61.6 |
| CDY65375 | Canola | nucleus | 57.2 | 60.25 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 70.43 | 59.74 |
| CDX70142 | Canola | cytosol | 55.64 | 59.58 |
| CDY45267 | Canola | nucleus | 46.3 | 58.33 |
| CDX98851 | Canola | nucleus | 54.09 | 57.92 |
| Zm00001d022110_P002 | Maize | nucleus | 66.15 | 53.97 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 55.64 | 49.65 |
| CDX80967 | Canola | mitochondrion | 26.07 | 37.02 |
| CDY11330 | Canola | mitochondrion | 25.68 | 35.87 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.79 | 33.79 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.79 | 33.79 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078DYT3 | InterPro:Alfin | EnsemblPlants:CDX92458 | ProteinID:CDX92458 |
| ProteinID:CDX92458.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 | EnsemblPlantsGene:GSBRNA2T00154228001 |
| InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 |
| PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EDF51B | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaA10g14970D
Coordinates
chrLK031872:+:764796..766692
Molecular Weight (calculated)
28998.0 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.672
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGGGAQY NPRTVEEVFR DFRGRRAAIL RALTTDVQEF FQQCDPEKDN LCLYGFPNEV WEVNLPAEEV PPELPEPALG INFARDGMME KDWLSLVAVH
101: SDAWLLSVSF FFGSKFGFDK VDRKRLYNMI NEVPTVFEVV TGTAKTQTKE KPSSANQNGS RSKSNSKVRG LDGKSSKTIQ AMEEEGLEEK EKEEDEEEHG
201: ETLCGACGDN YASDEFWICC DMCEKWFHGT CVKITPARAE HIKHYKCPSC SNKRARP
101: SDAWLLSVSF FFGSKFGFDK VDRKRLYNMI NEVPTVFEVV TGTAKTQTKE KPSSANQNGS RSKSNSKVRG LDGKSSKTIQ AMEEEGLEEK EKEEDEEEHG
201: ETLCGACGDN YASDEFWICC DMCEKWFHGT CVKITPARAE HIKHYKCPSC SNKRARP
001: MEGGTAHYSP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKQNLC LYGFPNEVWE VNLPAEEVPP ELPEPALGIN FARDGMQERN WLSLVAVHSD
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
Arabidopsis Description
AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.