Factsheet for Zm00001d022110_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97523	Sorghum	nucleus	80.95	94.8
Zm00001d049007_P001	Maize	cytosol	29.21	77.97
CDY51845	Canola	cytosol	16.83	75.71
Bra006562.1-P	Field mustard	cytosol	16.83	75.71
Os07t0608400-01	Rice	nucleus	65.71	74.46
KRH19253	Soybean	nucleus	57.46	72.11
VIT_11s0016g01500.t01	Wine grape	nucleus	57.46	71.83
TraesCS2A01G172100.2	Wheat	nucleus	62.22	71.79
TraesCS2D01G179400.2	Wheat	nucleus	61.9	71.43
TraesCS2B01G198500.2	Wheat	nucleus	61.9	71.43
KRH02655	Soybean	nucleus	56.83	71.03
KRH37475	Soybean	nucleus	55.87	70.97
Bra020107.1-P	Field mustard	cytosol	55.87	69.29
CDY70751	Canola	cytosol	55.87	69.29
CDY19781	Canola	cytosol	55.56	68.09
Bra036568.1-P	Field mustard	cytosol	55.56	68.09
AT5G26210.1	Thale cress	nucleus	54.92	67.84
Zm00001d044178_P001	Maize	cytosol	20.0	67.74
CDX87061	Canola	cytosol	55.24	67.7
CDY52629	Canola	nucleus	55.87	67.43
Bra009887.1-P	Field mustard	nucleus	55.87	67.43
CDX88221	Canola	nucleus	55.87	67.43
AT3G42790.1	Thale cress	nucleus	52.7	66.4
AT5G20510.1	Thale cress	cytosol	54.6	66.15
CDX92458	Canola	cytosol, nucleus, plastid	53.97	66.15
Zm00001d009466_P001	Maize	cytosol	20.32	65.98
CDY16540	Canola	cytosol	54.29	65.27
HORVU2Hr1G031990.2	Barley	nucleus	62.54	65.02
Bra034950.1-P	Field mustard	nucleus	51.43	63.78
CDY12340	Canola	cytosol, nucleus, plastid	51.43	63.78
CDY24988	Canola	cytosol, nucleus, plastid	50.48	63.6
CDX87962	Canola	cytosol, nucleus, plastid	51.11	63.39
Bra020543.1-P	Field mustard	cytosol, nucleus, plastid	50.48	62.6
CDY05535	Canola	cytosol, nucleus, plastid	50.48	62.6
Zm00001d028496_P001	Maize	cytosol	20.0	62.38
Zm00001d010241_P002	Maize	cytosol	32.06	62.35
Bra002307.1-P	Field mustard	nucleus	53.33	59.57
Zm00001d042582_P001	Maize	cytosol, mitochondrion, nucleus	48.57	59.53
Zm00001d038208_P001	Maize	nucleus	47.94	58.98
GSMUA_Achr10P...	Banana	nucleus	46.67	58.33
Zm00001d041767_P002	Maize	nucleus	48.57	57.74
Zm00001d012196_P005	Maize	nucleus	50.79	55.75
Zm00001d016861_P003	Maize	cytosol, nucleus, plastid	49.52	55.32
Zm00001d036294_P001	Maize	plastid	22.54	55.04
Zm00001d034627_P002	Maize	nucleus	43.49	54.8
Zm00001d050816_P002	Maize	cytosol, endoplasmic reticulum, nucleus	49.84	54.7
Zm00001d010834_P001	Maize	nucleus	43.81	54.55
Zm00001d005185_P001	Maize	nucleus	40.95	53.53
Zm00001d037537_P001	Maize	nucleus	42.22	51.55
Zm00001d023962_P001	Maize	nucleus	49.52	50.65
Zm00001d049006_P001	Maize	plastid	20.95	50.38
VIT_11s0016g01630.t01	Wine grape	plastid	15.87	49.51
KRH61563	Soybean	cytosol	33.65	48.18
Zm00001d025504_P001	Maize	nucleus	36.83	46.77
GSMUA_AchrUn_...	Banana	nucleus	42.54	44.37
Zm00001d025491_P002	Maize	nucleus	37.78	32.69
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	20.63	29.68
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	20.63	29.68

Protein Annotations

EntrezGene:100382843	MapMan:15.5.8	Gene3D:3.30.40.10	UniProt:A0A1D6IJA0	InterPro:Alfin	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0042393	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787
ProteinID:ONM59534.1	PFAM:PF00628	PFAM:PF12165	ScanProsite:PS01359	PFscan:PS50016	PANTHER:PTHR12321
PANTHER:PTHR12321:SF65	SMART:SM00249	SUPFAM:SSF57903	UniParc:UPI000842A17A	InterPro:Zinc_finger_PHD-type_CS	EnsemblPlantsGene:Zm00001d022110
EnsemblPlants:Zm00001d022110_P002	EnsemblPlants:Zm00001d022110_T002	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

Alfin-like-transcription factor 3PHD finger protein ALFIN-LIKE 4

Coordinates

chr7:+:170567006..170573875

Molecular Weight (calculated)

34765.0 Da

IEP (calculated)

4.813

GRAVY (calculated)

-0.547

Length

315 amino acids

Sequence
(BLAST)

001: MDSGYNPRTV EEVFRDFKGR RAGIIRALTT DAEDFFKQCD PGRVGCMPAK IGAISISFLL CVCNVMEGCW QLNSEPMVGD DDDDLDMVFT VSLEEKENLC
101: LYGFPNESWE VNLPAEEVPP DLPEPALGIN FARDGMQEKE WLSMVAAHSD AWLLSVAFYF GARFGFNKND RKRLYSLIDD LPMAFEIVSG KSETKAPAPP
201: SSSNHSNIKP KSNNKKKPPE PKVKQPKPRA PAEEGEEEDG SASEGEHGET LCGACKESYG PDEFWICCDL CEKWFHGKCV KITAAKAEHI KQYKCPSCTG
301: GGGVSNSGTK RARPS

Best Arabidopsis Sequence Match ( AT3G42790.1 )
(BLAST)

001: MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA

Arabidopsis Description

AL3AL3 [Source:UniProtKB/TrEMBL;Acc:A0A178VCG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.