Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022110_P002 | Maize | nucleus | 94.8 | 80.95 |
| CDY51845 | Canola | cytosol | 19.7 | 75.71 |
| Bra006562.1-P | Field mustard | cytosol | 19.7 | 75.71 |
| Os07t0608400-01 | Rice | nucleus | 77.32 | 74.82 |
| KRH19253 | Soybean | nucleus | 67.66 | 72.51 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 67.66 | 72.22 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 73.23 | 72.16 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 73.23 | 72.16 |
| KRH02655 | Soybean | nucleus | 67.29 | 71.83 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 72.86 | 71.79 |
| KRH37475 | Soybean | nucleus | 65.8 | 71.37 |
| CDY70751 | Canola | cytosol | 65.43 | 69.29 |
| Bra020107.1-P | Field mustard | cytosol | 65.43 | 69.29 |
| Bra036568.1-P | Field mustard | cytosol | 65.8 | 68.87 |
| CDY19781 | Canola | cytosol | 65.8 | 68.87 |
| CDX87061 | Canola | cytosol | 65.43 | 68.48 |
| AT5G26210.1 | Thale cress | nucleus | 64.68 | 68.24 |
| CDX88221 | Canola | nucleus | 65.8 | 67.82 |
| Bra009887.1-P | Field mustard | nucleus | 65.8 | 67.82 |
| CDY52629 | Canola | nucleus | 65.8 | 67.82 |
| AT5G20510.1 | Thale cress | cytosol | 64.68 | 66.92 |
| AT3G42790.1 | Thale cress | nucleus | 62.08 | 66.8 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 63.2 | 66.15 |
| CDY16540 | Canola | cytosol | 63.57 | 65.27 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 72.86 | 64.69 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 60.59 | 64.17 |
| Bra034950.1-P | Field mustard | nucleus | 60.59 | 64.17 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 59.48 | 64.0 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 60.22 | 63.78 |
| EES08261 | Sorghum | nucleus | 59.85 | 63.39 |
| Bra020543.1-P | Field mustard | cytosol, nucleus, plastid | 59.48 | 62.99 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 59.48 | 62.99 |
| EES05274 | Sorghum | nucleus | 59.11 | 62.11 |
| KXG33847 | Sorghum | nucleus | 57.99 | 60.94 |
| OQU78932 | Sorghum | nucleus | 57.62 | 59.85 |
| Bra002307.1-P | Field mustard | nucleus | 62.45 | 59.57 |
| EES18243 | Sorghum | nucleus | 56.51 | 59.14 |
| GSMUA_Achr10P... | Banana | nucleus | 55.39 | 59.13 |
| OQU77499 | Sorghum | nucleus | 53.16 | 56.52 |
| KXG26388 | Sorghum | cytosol | 52.42 | 56.4 |
| EES00286 | Sorghum | nucleus | 50.56 | 56.2 |
| EER90633 | Sorghum | nucleus | 51.3 | 55.2 |
| OQU88744 | Sorghum | cytosol | 48.33 | 53.72 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 18.96 | 50.49 |
| OQU88643 | Sorghum | extracellular, golgi, mitochondrion | 22.68 | 50.41 |
| KRH61563 | Soybean | cytosol | 39.41 | 48.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 50.93 | 45.36 |
| OQU77873 | Sorghum | cytosol | 33.09 | 35.74 |
| OQU77872 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.14 | 32.59 |
| OQU77871 | Sorghum | cytosol | 13.38 | 31.58 |
| KXG21847 | Sorghum | cytosol, plastid | 33.09 | 30.69 |
| KXG24231 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 28.62 | 28.52 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | EntrezGene:8079174 | InterPro:Alfin | UniProt:C5XDY7 | EnsemblPlants:EER97523 |
| ProteinID:EER97523 | ProteinID:EER97523.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 |
| GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 |
| PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF65 | SMART:SM00249 | EnsemblPlantsGene:SORBI_3002G371000 | SUPFAM:SSF57903 |
| unigene:Sbi.19403 | UniParc:UPI0001A838BF | RefSeq:XP_002461002.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:72983270..72988756
Molecular Weight (calculated)
29657.7 Da
IEP (calculated)
5.758
GRAVY (calculated)
-0.748
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGYNPRTV EEVFRDFKGR RAGIIRALTT DAEDFFKQCD PEKENLCLYG FPNESWEVNL PAEEVPPELP EPALGINFAR DGMQEKEWLS MVAAHSDAWL
101: LSVAFYFGAR FGFNRNDRKR LYSLIDDLPM AFEIVSGKSE TKAPAPAPPT PNSSNHSNIK SKSNNKKKPS EPKVKQTKPR APAEEGPGGE EEDGSASEGE
201: HGETLCGACK ESYGPDEFWI CCDLCEKWFH GKCVKITAAK AEHIKQYKCP SCTGGGGVGN SGTKRARPS
101: LSVAFYFGAR FGFNRNDRKR LYSLIDDLPM AFEIVSGKSE TKAPAPAPPT PNSSNHSNIK SKSNNKKKPS EPKVKQTKPR APAEEGPGGE EEDGSASEGE
201: HGETLCGACK ESYGPDEFWI CCDLCEKWFH GKCVKITAAK AEHIKQYKCP SCTGGGGVGN SGTKRARPS
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.