CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77871	Sorghum	cytosol	26.51	57.89
OQU77872	Sorghum	cytosol, mitochondrion, nucleus, plastid	49.8	55.36
OQU88744	Sorghum	cytosol	36.95	38.02
EER90633	Sorghum	nucleus	37.35	37.2
OQU77499	Sorghum	nucleus	36.55	35.97
GSMUA_Achr10P...	Banana	nucleus	8.03	35.71
EES18243	Sorghum	nucleus	36.55	35.41
EES00286	Sorghum	nucleus	34.14	35.12
EES08261	Sorghum	nucleus	35.74	35.04
EES05274	Sorghum	nucleus	35.74	34.77
KXG33847	Sorghum	nucleus	35.74	34.77
KXG21847	Sorghum	cytosol, plastid	39.76	34.14
OQU78932	Sorghum	nucleus	35.34	33.98
KXG26388	Sorghum	cytosol	33.73	33.6
EER97523	Sorghum	nucleus	35.74	33.09
KXG24231	Sorghum	cytosol, mitochondrion, nucleus, plastid	35.34	32.59
TraesCS4A01G397400.1	Wheat	cytosol, nucleus, plastid	28.11	31.96
TraesCS7A01G097400.1	Wheat	cytosol	28.11	31.96
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	28.11	31.96
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	27.71	31.51
OQU88643	Sorghum	extracellular, golgi, mitochondrion	15.26	31.41
TraesCS4A01G397500.1	Wheat	cytosol	26.91	30.59
TraesCS7D01G093600.1	Wheat	plastid	35.74	30.48
TraesCS7D01G093700.1	Wheat	plastid	35.34	28.95
HORVU0Hr1G025310.1	Barley	plastid	19.28	28.74
HORVU7Hr1G021380.1	Barley	plastid	22.49	28.57

Protein Annotations

MapMan:15.5.8	Gene3D:3.30.40.10	UniProt:A0A1Z5R268	InterPro:Alfin	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0042393	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787	EnsemblPlants:OQU77873
ProteinID:OQU77873	ProteinID:OQU77873.1	PFAM:PF00628	PFAM:PF12165	ScanProsite:PS01359	PFscan:PS50016
PANTHER:PTHR12321	PANTHER:PTHR12321:SF94	SMART:SM00249	EnsemblPlantsGene:SORBI_3009G116000	SUPFAM:SSF57903	UniParc:UPI000B8BAE21
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:45852322..45860154

Molecular Weight (calculated)

28767.7 Da

IEP (calculated)

4.756

GRAVY (calculated)

-0.709

Length

249 amino acids

Sequence
(BLAST)

001: MAVERRSPDP PPRSESESGA LRRRQPTRCQ ALTLRLPPYT VESVFDKYSK RRGALIRALT EDEEAFFQKC DPGMQPLHLY GDTDGSWEVK PPEFMLPALE
101: VQPTPGINIR RDSMERHKWL QEVAVHCDVW LMKIAGFAAS YMTATERGQL FTMIIDLPTV QEILLSHVEG KRSSGPTEAD EVLEEEEEDD DNNFCASCHS
201: RYKANTFWIS CDECEKWYHG KCVNITPREA EHNEHYECPD CYYERVGWS

Best Arabidopsis Sequence Match ( AT5G05610.1 )
(BLAST)

001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q

Arabidopsis Description

AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.