Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 96.8 | 96.8 |
| TraesCS4A01G397400.1 | Wheat | cytosol, nucleus, plastid | 96.8 | 96.8 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 96.35 | 96.35 |
| TraesCS7A01G097400.1 | Wheat | cytosol | 87.21 | 87.21 |
| TraesCS7D01G093600.1 | Wheat | plastid | 89.04 | 66.78 |
| TraesCS7D01G093700.1 | Wheat | plastid | 89.5 | 64.47 |
| HORVU7Hr1G021380.1 | Barley | plastid | 33.79 | 37.76 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 32.88 | 32.88 |
| HORVU0Hr1G025310.1 | Barley | plastid | 24.2 | 31.74 |
| GSMUA_Achr10P... | Banana | nucleus | 7.76 | 30.36 |
| OQU77871 | Sorghum | cytosol | 15.53 | 29.82 |
| OQU77872 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 29.68 | 29.02 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 33.33 | 28.4 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 31.96 | 27.56 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 32.42 | 27.0 |
| OQU77873 | Sorghum | cytosol | 30.59 | 26.91 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 31.51 | 25.27 |
| KXG24231 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.4 | 22.22 |
| KXG21847 | Sorghum | cytosol, plastid | 27.85 | 21.03 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 26.94 | 20.85 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | InterPro:Alfin | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042393 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | PANTHER:PTHR12321 |
| PANTHER:PTHR12321:SF65 | SMART:SM00249 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS4A01G397500 | EnsemblPlants:TraesCS4A01G397500.1 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | : | : | : |
Description
No Description!
Coordinates
chr4A:-:672793564..672794633
Molecular Weight (calculated)
24953.1 Da
IEP (calculated)
5.305
GRAVY (calculated)
-0.599
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLYGYPDGS WELTLPEEMV PPGLPVPTRG INRRRDYVNR SDYLTLVAHH SDSWLMGVTF FLSTHLDANQ RIRSLDMVNE MRTVHDEFYL SYDLSWLSRF
101: ARYNANKESS ALTQENVSNP DVVSITHAEE NVPPAQDSMQ VLSAPNRDSR KPAKDKQKDN KVTDFCGSCN APYHANAFWI GCDGCDQWFH GKCVNITASE
201: AKHIEEYKSP DCIREVIGE
101: ARYNANKESS ALTQENVSNP DVVSITHAEE NVPPAQDSMQ VLSAPNRDSR KPAKDKQKDN KVTDFCGSCN APYHANAFWI GCDGCDQWFH GKCVNITASE
201: AKHIEEYKSP DCIREVIGE
001: MRSGYERFRL LDTLLCVLLR FDFNFWVFVV IEKENLCLYG HPNESWEVNL PAEEVPPELP EPALGINFAR DGMQRKDWLS LVAVHSDCWL LSVSFYFGAR
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
Arabidopsis Description
AL2PHD finger protein ALFIN-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRM4]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.