CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77872	Sorghum	cytosol, mitochondrion, nucleus, plastid	92.98	47.32
GSMUA_Achr10P...	Banana	nucleus	16.67	33.93
OQU77873	Sorghum	cytosol	57.89	26.51
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	30.7	15.98
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	30.7	15.98
TraesCS4A01G397400.1	Wheat	cytosol, nucleus, plastid	30.7	15.98
EES18243	Sorghum	nucleus	35.09	15.56
TraesCS7A01G097400.1	Wheat	cytosol	29.82	15.53
TraesCS4A01G397500.1	Wheat	cytosol	29.82	15.53
KXG33847	Sorghum	nucleus	34.21	15.23
EES08261	Sorghum	nucleus	33.33	14.96
KXG24231	Sorghum	cytosol, mitochondrion, nucleus, plastid	32.46	13.7
EES05274	Sorghum	nucleus	30.7	13.67
OQU78932	Sorghum	nucleus	30.7	13.51
EER97523	Sorghum	nucleus	31.58	13.38
TraesCS7D01G093600.1	Wheat	plastid	34.21	13.36
OQU88744	Sorghum	cytosol	28.07	13.22
OQU77499	Sorghum	nucleus	28.95	13.04
TraesCS7D01G093700.1	Wheat	plastid	34.21	12.83
KXG26388	Sorghum	cytosol	28.07	12.8
EER90633	Sorghum	nucleus	28.07	12.8
KXG21847	Sorghum	cytosol, plastid	32.46	12.76
EES00286	Sorghum	nucleus	26.32	12.4
OQU88643	Sorghum	extracellular, golgi, mitochondrion	1.75	1.65
HORVU7Hr1G021380.1	Barley	plastid	0.88	0.51
HORVU0Hr1G025310.1	Barley	plastid	0.0	0.0

Protein Annotations

MapMan:15.5.8	Gene3D:3.30.40.10	UniProt:A0A1Z5R343	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR013083	InterPro:IPR019787	EnsemblPlants:OQU77871	ProteinID:OQU77871	ProteinID:OQU77871.1	PFAM:PF00628
ScanProsite:PS01359	PFscan:PS50016	PANTHER:PTHR12321	PANTHER:PTHR12321:SF79	SMART:SM00249	EnsemblPlantsGene:SORBI_3009G115900
SUPFAM:SSF57903	UniParc:UPI000B8BA4CE	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:45798605..45799327

Molecular Weight (calculated)

13320.0 Da

IEP (calculated)

4.217

GRAVY (calculated)

-1.122

Length

114 amino acids

Sequence
(BLAST)

001: MSRCMYHIEE KRSSGPDEAN EVVEEQEVYH TEEQRSSGPT KANEVLEEED DVINDDNDYC ASCNSRYKVN AFWICCDECG KWYHGKCVNI TSSEAEHKER
101: YECPDCYNER VGWS

Best Arabidopsis Sequence Match ( AT2G02470.1 )
(BLAST)

001: MEGITHPIPR TVEEVFSDFR GRRAGLIKAL TNDMVKFYQT CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS
101: WLLSVAFYFG ARFGFGKNER KRLFQMINEL PTIFEVVSGN AKQSKDLSVN NNNSKSKPSG VKSRQSESLS KVAKMSSPPP KEEEEEEDES EDESEDDEQG
201: AVCGACGDNY GTDEFWICCD ACEKWFHGKC VKITPAKAEH IKHYKCPTCS NKRARP

Arabidopsis Description

AL6AL6 [Source:UniProtKB/TrEMBL;Acc:A0A178VQJ7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.