Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 1
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88744 | Sorghum | cytosol | 65.29 | 32.64 |
| Zm00001d005185_P001 | Maize | nucleus | 61.98 | 31.12 |
| HORVU2Hr1G052960.2 | Barley | cytosol | 59.5 | 29.27 |
| Os07t0233300-01 | Rice | nucleus | 57.85 | 28.69 |
| Solyc09g005360.2.1 | Tomato | nucleus | 56.2 | 28.22 |
| PGSC0003DMT400059399 | Potato | nucleus | 56.2 | 28.22 |
| Solyc10g076690.1.1 | Tomato | nucleus | 55.37 | 27.92 |
| PGSC0003DMT400049364 | Potato | nucleus | 55.37 | 27.92 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 55.37 | 27.69 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 55.37 | 27.69 |
| GSMUA_Achr10P... | Banana | nucleus | 55.37 | 27.69 |
| KRH38049 | Soybean | nucleus | 53.72 | 27.31 |
| KRH65724 | Soybean | nucleus | 53.72 | 27.2 |
| Solyc10g085180.1.1 | Tomato | nucleus | 53.72 | 27.08 |
| AT5G05610.1 | Thale cress | nucleus | 53.72 | 26.97 |
| VIT_13s0067g01000.t01 | Wine grape | nucleus | 53.72 | 26.97 |
| EER90633 | Sorghum | nucleus | 55.37 | 26.8 |
| KRH00242 | Soybean | nucleus | 52.89 | 26.78 |
| KRH49390 | Soybean | nucleus | 52.89 | 26.78 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 53.72 | 26.75 |
| PGSC0003DMT400028638 | Potato | nucleus | 52.89 | 26.67 |
| CDX73886 | Canola | nucleus | 53.72 | 26.53 |
| CDY00726 | Canola | nucleus | 53.72 | 26.53 |
| AT3G11200.1 | Thale cress | nucleus | 53.72 | 26.42 |
| KRH56367 | Soybean | peroxisome | 47.93 | 26.36 |
| Bra034860.1-P | Field mustard | nucleus | 53.72 | 26.32 |
| CDY08544 | Canola | nucleus | 53.72 | 26.32 |
| CDY01002 | Canola | nucleus | 53.72 | 26.0 |
| Bra034169.1-P | Field mustard | nucleus | 53.72 | 26.0 |
| CDY36305 | Canola | cytosol | 53.72 | 26.0 |
| KRH69940 | Soybean | peroxisome | 47.11 | 25.91 |
| CDX70142 | Canola | cytosol | 51.24 | 25.83 |
| Bra009121.1-P | Field mustard | nucleus | 50.41 | 25.42 |
| EES00286 | Sorghum | nucleus | 50.41 | 25.21 |
| CDX98851 | Canola | nucleus | 49.59 | 25.0 |
| OQU77499 | Sorghum | nucleus | 52.07 | 24.9 |
| Solyc06g051420.2.1 | Tomato | nucleus | 49.59 | 24.49 |
| EES05274 | Sorghum | nucleus | 49.59 | 23.44 |
| EES08261 | Sorghum | nucleus | 48.76 | 23.23 |
| OQU78932 | Sorghum | nucleus | 49.59 | 23.17 |
| EES18243 | Sorghum | nucleus | 48.76 | 22.96 |
| KXG26388 | Sorghum | cytosol | 47.11 | 22.8 |
| Bra001393.1-P | Field mustard | nucleus | 47.11 | 22.8 |
| EER97523 | Sorghum | nucleus | 50.41 | 22.68 |
| KXG33847 | Sorghum | nucleus | 47.11 | 22.27 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 52.07 | 21.88 |
| OQU77873 | Sorghum | cytosol | 31.41 | 15.26 |
| OQU77872 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 26.45 | 14.29 |
| KXG21847 | Sorghum | cytosol, plastid | 33.88 | 14.14 |
| KXG24231 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 28.93 | 12.96 |
| OQU77871 | Sorghum | cytosol | 1.65 | 1.75 |
Protein Annotations
| MapMan:15.5.8 | UniProt:A0A1W0W2R5 | InterPro:Alfin | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042393 | EnsemblPlants:OQU88643 | ProteinID:OQU88643 |
| ProteinID:OQU88643.1 | PFAM:PF12165 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF96 | EnsemblPlantsGene:SORBI_3002G066901 | TMHMM:TMhelix |
| UniParc:UPI0009DC8A69 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:6620911..6621975
Molecular Weight (calculated)
14063.0 Da
IEP (calculated)
9.656
GRAVY (calculated)
-0.136
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: KYRIRSEPPR RFGCARSCLS LFGIWGFDWF LRVRVEKENL CLYGHPNGGW EVSLPVEEVL SEMPEPALKI NFARDGMKRR DWLSLIAVYS DAWVISVAFF
101: FAAKLNANNR LDFTPSKTKL F
101: FAAKLNANNR LDFTPSKTKL F
001: MRSGYERFRL LDTLLCVLLR FDFNFWVFVV IEKENLCLYG HPNESWEVNL PAEEVPPELP EPALGINFAR DGMQRKDWLS LVAVHSDCWL LSVSFYFGAR
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
101: LNRNERKRLF SLINDLPTLF DVVTGRKAMK DNKPSSDSGS KSRNGTKRSI DGQTKSSTPK LMEESYEEEE EEDEHGDTLC GSCGGHYTNE EFWICCDVCE
201: RWYHGKCVKI TPAKAESIKQ YKCPPCCAKK GRQ
Arabidopsis Description
AL2PHD finger protein ALFIN-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRM4]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.