Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70142 | Canola | cytosol | 92.5 | 92.5 |
| AT5G05610.1 | Thale cress | nucleus | 88.75 | 88.38 |
| CDX73886 | Canola | nucleus | 79.58 | 77.96 |
| CDY00726 | Canola | nucleus | 78.75 | 77.14 |
| CDY08544 | Canola | nucleus | 78.33 | 76.11 |
| CDY36305 | Canola | cytosol | 79.17 | 76.0 |
| CDY01002 | Canola | nucleus | 78.75 | 75.6 |
| PGSC0003DMT400059399 | Potato | nucleus | 73.75 | 73.44 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 73.33 | 72.43 |
| KRH65724 | Soybean | nucleus | 70.42 | 70.71 |
| KRH38049 | Soybean | nucleus | 70.0 | 70.59 |
| KRH49390 | Soybean | nucleus | 69.17 | 69.46 |
| PGSC0003DMT400049364 | Potato | nucleus | 68.75 | 68.75 |
| KRH00242 | Soybean | nucleus | 67.92 | 68.2 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 68.75 | 68.18 |
| CDY17594 | Canola | cytosol | 33.33 | 67.8 |
| GSMUA_Achr10P... | Banana | nucleus | 67.92 | 67.36 |
| PGSC0003DMT400028638 | Potato | nucleus | 67.08 | 67.08 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 67.08 | 66.53 |
| KRH56367 | Soybean | peroxisome | 58.33 | 63.64 |
| Solyc06g051420.2.1 | Tomato | nucleus | 64.58 | 63.27 |
| KRH69940 | Soybean | peroxisome | 57.92 | 63.18 |
| Os07t0233300-01 | Rice | nucleus | 62.92 | 61.89 |
| CDY51845 | Canola | cytosol | 17.92 | 61.43 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 71.67 | 59.72 |
| HORVU2Hr1G052960.2 | Barley | cytosol | 60.83 | 59.35 |
| OQU88744 | Sorghum | cytosol | 59.58 | 59.09 |
| EER90633 | Sorghum | nucleus | 60.83 | 58.4 |
| Os03t0818300-01 | Rice | nucleus | 60.0 | 58.3 |
| Zm00001d034627_P002 | Maize | nucleus | 60.42 | 58.0 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 58.75 | 57.79 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 58.75 | 57.79 |
| Zm00001d005185_P001 | Maize | nucleus | 57.92 | 57.68 |
| CDY03049 | Canola | cytosol | 58.75 | 57.55 |
| EES00286 | Sorghum | nucleus | 57.5 | 57.02 |
| CDX81645 | Canola | cytosol | 57.08 | 56.38 |
| TraesCS5D01G486400.2 | Wheat | nucleus | 58.75 | 56.18 |
| CDY53545 | Canola | cytosol | 56.67 | 55.97 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 59.17 | 55.91 |
| CDY19781 | Canola | cytosol | 59.58 | 55.64 |
| CDX84026 | Canola | nucleus | 57.92 | 55.6 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 58.75 | 55.51 |
| CDY70751 | Canola | cytosol | 58.75 | 55.51 |
| TraesCS5B01G486600.1 | Wheat | nucleus | 57.92 | 55.38 |
| Zm00001d010834_P001 | Maize | nucleus | 58.33 | 55.34 |
| CDX87061 | Canola | cytosol | 59.17 | 55.25 |
| CDX96851 | Canola | cytosol | 57.5 | 55.2 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 58.33 | 55.12 |
| OQU77499 | Sorghum | nucleus | 57.92 | 54.94 |
| CDY45267 | Canola | nucleus | 46.67 | 54.9 |
| CDY52629 | Canola | nucleus | 59.17 | 54.41 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 57.92 | 54.09 |
| CDX88221 | Canola | nucleus | 58.75 | 54.02 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 56.25 | 54.0 |
| CDY65375 | Canola | nucleus | 54.58 | 53.69 |
| CDY16540 | Canola | cytosol | 58.33 | 53.44 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 57.08 | 53.31 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 57.08 | 53.31 |
| TraesCS1D01G111700.1 | Wheat | nucleus | 57.08 | 53.31 |
| CDY17593 | Canola | cytosol | 25.42 | 51.69 |
| Zm00001d037537_P001 | Maize | nucleus | 54.17 | 50.39 |
| OQU88643 | Sorghum | extracellular, golgi, mitochondrion | 25.0 | 49.59 |
| HORVU5Hr1G112420.6 | Barley | nucleus | 55.0 | 48.0 |
| HORVU1Hr1G024210.1 | Barley | nucleus | 57.08 | 40.41 |
| CDX80967 | Canola | mitochondrion | 28.75 | 38.12 |
| CDY11330 | Canola | mitochondrion | 28.75 | 37.5 |
| Os05t0163100-01 | Rice | nucleus | 34.17 | 30.83 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 27.5 | 30.14 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 27.5 | 30.14 |
| HORVU5Hr1G059130.2 | Barley | nucleus | 17.92 | 28.67 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078ECE3 | InterPro:Alfin | EnsemblPlants:CDX98851 | ProteinID:CDX98851 |
| ProteinID:CDX98851.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 | EnsemblPlantsGene:GSBRNA2T00106952001 |
| InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 |
| PANTHER:PTHR12321 | PANTHER:PTHR12321:SF96 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EEEB94 | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaC09g49840D
Coordinates
chrLK031907:-:273783..275258
Molecular Weight (calculated)
27076.9 Da
IEP (calculated)
5.645
GRAVY (calculated)
-0.607
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGESSNPGT VEEIFKDFSG RRSSILQALS VDVDKFYSLC NPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRHDWL SLVAVHSDCW
101: LLSVSSYFGA RLSRNEKKRL FSLINDLPTL FEVVTSRKTI KDKPSMDHES KSQNGVNRSI EGEMKSTGKL MQESSEDEED EHGDTYCGSC GGHYINAEFW
201: ICCDVCERWY HGKCVKIKPA KAESMKQYKC PSCCTKKGRQ
101: LLSVSSYFGA RLSRNEKKRL FSLINDLPTL FEVVTSRKTI KDKPSMDHES KSQNGVNRSI EGEMKSTGKL MQESSEDEED EHGDTYCGSC GGHYINAEFW
201: ICCDVCERWY HGKCVKIKPA KAESMKQYKC PSCCTKKGRQ
001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
Arabidopsis Description
AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.