Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53545 | Canola | cytosol | 98.35 | 98.35 |
| CDX96851 | Canola | cytosol | 90.53 | 88.0 |
| CDX84026 | Canola | nucleus | 89.71 | 87.2 |
| AT1G14510.1 | Thale cress | nucleus | 88.07 | 84.92 |
| CDY17594 | Canola | cytosol | 39.92 | 82.2 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 79.01 | 78.69 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 79.01 | 78.69 |
| CDY03049 | Canola | cytosol | 77.37 | 76.73 |
| KRH01887 | Soybean | nucleus | 78.19 | 75.4 |
| KRH51269 | Soybean | nucleus | 77.78 | 75.3 |
| CDY17593 | Canola | cytosol | 36.21 | 74.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.04 | 74.38 |
| VIT_12s0035g01980.t01 | Wine grape | nucleus | 76.95 | 73.91 |
| Solyc01g102760.2.1 | Tomato | nucleus | 75.31 | 73.79 |
| Solyc01g102750.2.1 | Tomato | nucleus | 74.49 | 72.69 |
| PGSC0003DMT400047018 | Potato | nucleus | 74.07 | 72.58 |
| CDY65375 | Canola | nucleus | 71.6 | 71.31 |
| CDY45267 | Canola | nucleus | 58.85 | 70.1 |
| CDY51845 | Canola | cytosol | 19.75 | 68.57 |
| Zm00001d010241_P002 | Maize | cytosol | 44.86 | 67.28 |
| GSMUA_Achr10P... | Banana | nucleus | 69.96 | 66.93 |
| GSMUA_Achr3P16750_001 | Banana | nucleus | 68.31 | 65.61 |
| GSMUA_Achr2P05660_001 | Banana | nucleus | 68.31 | 65.61 |
| Os11t0244800-01 | Rice | nucleus | 68.31 | 65.35 |
| EES08261 | Sorghum | nucleus | 68.31 | 65.35 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 67.49 | 64.57 |
| TraesCS4D01G085300.1 | Wheat | peroxisome | 67.49 | 64.57 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 67.49 | 64.57 |
| GSMUA_Achr8P32300_001 | Banana | nucleus | 67.9 | 64.45 |
| Zm00001d038208_P001 | Maize | nucleus | 67.9 | 64.45 |
| GSMUA_Achr6P28820_001 | Banana | nucleus | 67.08 | 64.43 |
| GSMUA_Achr7P02940_001 | Banana | nucleus | 67.08 | 64.43 |
| Os05t0419100-01 | Rice | nucleus | 67.9 | 63.95 |
| GSMUA_Achr11P... | Banana | nucleus | 66.26 | 63.89 |
| EES18243 | Sorghum | nucleus | 67.49 | 63.81 |
| HORVU4Hr1G015060.3 | Barley | nucleus | 66.67 | 63.78 |
| TraesCS3D01G398800.2 | Wheat | cytosol | 67.49 | 62.36 |
| EES05274 | Sorghum | nucleus | 65.43 | 62.11 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 67.08 | 61.98 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 67.08 | 61.98 |
| CDX87061 | Canola | cytosol | 65.43 | 61.87 |
| CDY19781 | Canola | cytosol | 65.43 | 61.87 |
| OQU78932 | Sorghum | nucleus | 65.84 | 61.78 |
| CDY52629 | Canola | nucleus | 66.26 | 61.69 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 55.56 | 61.64 |
| TraesCS1D01G262200.1 | Wheat | peroxisome | 66.26 | 61.45 |
| KXG33847 | Sorghum | nucleus | 64.61 | 61.33 |
| CDX88221 | Canola | nucleus | 65.84 | 61.3 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 66.26 | 61.22 |
| CDY70751 | Canola | cytosol | 63.79 | 61.02 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 63.79 | 61.02 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 63.79 | 61.02 |
| HORVU1Hr1G064250.4 | Barley | mitochondrion, nucleus, peroxisome | 66.26 | 60.98 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 63.79 | 60.31 |
| Zm00001d041767_P002 | Maize | nucleus | 65.43 | 60.0 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 63.37 | 59.92 |
| KXG26388 | Sorghum | cytosol | 61.32 | 59.6 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 60.91 | 59.2 |
| Os01t0887700-01 | Rice | nucleus | 66.26 | 59.19 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 61.73 | 59.06 |
| CDY16540 | Canola | cytosol | 63.37 | 58.78 |
| Os02t0564100-01 | Rice | nucleus | 64.2 | 58.43 |
| Os04t0444900-01 | Rice | nucleus | 61.32 | 58.2 |
| CDY00726 | Canola | nucleus | 58.44 | 57.96 |
| CDX73886 | Canola | nucleus | 58.44 | 57.96 |
| CDX70142 | Canola | cytosol | 56.79 | 57.5 |
| CDY08544 | Canola | nucleus | 58.02 | 57.09 |
| CDX98851 | Canola | nucleus | 56.38 | 57.08 |
| CDY36305 | Canola | cytosol | 58.44 | 56.8 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 65.84 | 56.74 |
| CDY01002 | Canola | nucleus | 58.02 | 56.4 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 65.43 | 55.4 |
| GSMUA_AchrUn_... | Banana | plastid | 28.81 | 54.69 |
| Zm00001d012196_P005 | Maize | nucleus | 63.79 | 54.01 |
| Zm00001d023962_P001 | Maize | nucleus | 65.84 | 51.95 |
| Zm00001d025504_P001 | Maize | nucleus | 50.62 | 49.6 |
| HORVU3Hr1G090540.1 | Barley | nucleus | 67.08 | 46.57 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 53.09 | 44.79 |
| GSMUA_Achr10P... | Banana | nucleus | 45.27 | 42.31 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 44.44 | 38.16 |
| CDX80967 | Canola | mitochondrion | 28.4 | 38.12 |
| CDY11330 | Canola | mitochondrion | 28.4 | 37.5 |
| TraesCS2D01G311200.1 | Wheat | nucleus | 43.62 | 37.46 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 43.62 | 37.46 |
| Zm00001d025491_P002 | Maize | nucleus | 52.67 | 35.16 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 29.22 | 32.42 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 29.22 | 32.42 |
| HORVU2Hr1G077670.3 | Barley | nucleus | 42.8 | 29.3 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078CXV0 | InterPro:Alfin | EnsemblPlants:CDX81645 | ProteinID:CDX81645 |
| ProteinID:CDX81645.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 | EnsemblPlantsGene:GSBRNA2T00136558001 |
| InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 |
| PANTHER:PTHR12321 | PANTHER:PTHR12321:SF60 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EF28E3 | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
BnaC08g39560D
Coordinates
chrLK031826:-:155355..157149
Molecular Weight (calculated)
27285.0 Da
IEP (calculated)
5.223
GRAVY (calculated)
-0.654
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGIQNPVVS RSVEEVFGDF RGRRAGLLKA LSTDVRKFYH ECDPDKENLC LYGLPNETWE VNLPVDEVPP ELPEPALGIN FARDGMPEKD WISLVAVHSD
101: SWLISVAFYF GARFGFGKNE RKRLFQMIND LPTIFEVITG NAKQSKDQSA NNHNSSRTKP SGVKASKMSP PPREDDESGE DEEDDEQGAV CGTCGDNHDD
201: FWICCDACEK WFHGKCVKIT PAKAEHIKHY KCPTCSTNKK IKA
101: SWLISVAFYF GARFGFGKNE RKRLFQMIND LPTIFEVITG NAKQSKDQSA NNHNSSRTKP SGVKASKMSP PPREDDESGE DEEDDEQGAV CGTCGDNHDD
201: FWICCDACEK WFHGKCVKIT PAKAEHIKHY KCPTCSTNKK IKA
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.