Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRH54981 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G02470.1 | KRH54981 | AT4G30860.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01887 | Soybean | nucleus | 98.8 | 98.41 |
| CDY17594 | Canola | cytosol | 40.64 | 86.44 |
| Solyc01g102760.2.1 | Tomato | nucleus | 84.86 | 85.89 |
| Solyc01g102750.2.1 | Tomato | nucleus | 83.67 | 84.34 |
| PGSC0003DMT400047018 | Potato | nucleus | 83.27 | 84.27 |
| VIT_12s0035g01980.t01 | Wine grape | nucleus | 84.86 | 84.19 |
| Bra017415.1-P | Field mustard | cytosol, nucleus, plastid | 80.48 | 82.79 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 80.48 | 82.79 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 80.48 | 82.79 |
| AT1G14510.1 | Thale cress | nucleus | 82.07 | 81.75 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 83.27 | 81.64 |
| CDX84026 | Canola | nucleus | 80.48 | 80.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.65 | 80.17 |
| CDX96851 | Canola | cytosol | 79.68 | 80.0 |
| Bra016698.1-P | Field mustard | cytosol | 79.68 | 80.0 |
| Bra024817.1-P | Field mustard | nucleus | 78.09 | 79.67 |
| CDY03049 | Canola | cytosol | 77.29 | 79.18 |
| CDX81645 | Canola | cytosol | 75.3 | 77.78 |
| CDY53545 | Canola | cytosol | 74.9 | 77.37 |
| Bra026825.1-P | Field mustard | nucleus | 74.9 | 77.05 |
| KRH71913 | Soybean | cytosol | 29.08 | 76.84 |
| CDY17593 | Canola | cytosol | 35.46 | 75.42 |
| KRH37475 | Soybean | nucleus | 74.5 | 75.4 |
| KRH23260 | Soybean | nucleus | 73.71 | 75.2 |
| KRH47546 | Soybean | nucleus | 75.7 | 75.1 |
| GSMUA_Achr3P16750_001 | Banana | nucleus | 75.3 | 74.7 |
| Zm00001d010241_P002 | Maize | cytosol | 48.21 | 74.69 |
| KRH19253 | Soybean | nucleus | 74.5 | 74.5 |
| KRH06119 | Soybean | nucleus | 74.9 | 74.31 |
| EES08261 | Sorghum | nucleus | 74.5 | 73.62 |
| GSMUA_Achr10P... | Banana | nucleus | 74.5 | 73.62 |
| GSMUA_Achr2P05660_001 | Banana | nucleus | 74.1 | 73.52 |
| KRH10063 | Soybean | nucleus | 72.51 | 73.39 |
| Os11t0244800-01 | Rice | nucleus | 74.1 | 73.23 |
| GSMUA_Achr8P32300_001 | Banana | nucleus | 74.5 | 73.05 |
| GSMUA_Achr11P... | Banana | nucleus | 73.31 | 73.02 |
| KRH15616 | Soybean | nucleus | 74.1 | 72.66 |
| KRH02655 | Soybean | nucleus | 72.91 | 72.62 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 73.31 | 72.44 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 73.31 | 72.44 |
| TraesCS4D01G085300.1 | Wheat | peroxisome | 73.31 | 72.44 |
| GSMUA_Achr7P02940_001 | Banana | nucleus | 72.91 | 72.33 |
| HORVU4Hr1G015060.3 | Barley | nucleus | 72.91 | 72.05 |
| GSMUA_Achr6P28820_001 | Banana | nucleus | 72.11 | 71.54 |
| EES18243 | Sorghum | nucleus | 72.51 | 70.82 |
| Zm00001d038208_P001 | Maize | nucleus | 72.11 | 70.7 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 60.56 | 69.41 |
| Os05t0419100-01 | Rice | nucleus | 71.31 | 69.38 |
| HORVU1Hr1G064250.4 | Barley | mitochondrion, nucleus, peroxisome | 72.51 | 68.94 |
| TraesCS1D01G262200.1 | Wheat | peroxisome | 71.71 | 68.7 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 71.71 | 68.44 |
| EES05274 | Sorghum | nucleus | 69.32 | 67.97 |
| KRH38049 | Soybean | nucleus | 63.35 | 66.81 |
| KXG33847 | Sorghum | nucleus | 68.13 | 66.8 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 67.73 | 66.15 |
| KRH65724 | Soybean | nucleus | 62.95 | 66.11 |
| OQU78932 | Sorghum | nucleus | 68.13 | 66.02 |
| KRH49390 | Soybean | nucleus | 62.55 | 65.69 |
| KRH00242 | Soybean | nucleus | 62.55 | 65.69 |
| GSMUA_AchrUn_... | Banana | plastid | 33.47 | 65.62 |
| Os01t0887700-01 | Rice | nucleus | 70.52 | 65.07 |
| TraesCS3D01G398800.2 | Wheat | cytosol | 68.13 | 65.02 |
| KRH26115 | Soybean | endoplasmic reticulum, extracellular | 22.71 | 64.77 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 67.73 | 64.64 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 67.73 | 64.64 |
| Os02t0564100-01 | Rice | nucleus | 68.53 | 64.42 |
| Zm00001d041767_P002 | Maize | nucleus | 66.93 | 63.4 |
| Os04t0444900-01 | Rice | nucleus | 64.54 | 63.28 |
| KXG26388 | Sorghum | cytosol | 62.95 | 63.2 |
| KRH05401 | Soybean | endoplasmic reticulum, nucleus, plastid | 60.96 | 61.69 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 68.92 | 61.35 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 69.32 | 60.63 |
| KRH56367 | Soybean | peroxisome | 52.99 | 60.45 |
| KRH69940 | Soybean | peroxisome | 51.39 | 58.64 |
| Zm00001d012196_P005 | Maize | nucleus | 66.93 | 58.54 |
| KRH62601 | Soybean | cytosol | 35.06 | 56.77 |
| Zm00001d023962_P001 | Maize | nucleus | 66.93 | 54.55 |
| KRH61563 | Soybean | cytosol | 45.42 | 51.82 |
| Zm00001d025504_P001 | Maize | nucleus | 51.0 | 51.61 |
| HORVU3Hr1G090540.1 | Barley | nucleus | 67.73 | 48.57 |
| GSMUA_Achr10P... | Banana | nucleus | 45.82 | 44.23 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 45.82 | 40.64 |
| TraesCS2D01G311200.1 | Wheat | nucleus | 45.02 | 39.93 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 45.02 | 39.93 |
| Zm00001d025491_P002 | Maize | nucleus | 54.18 | 37.36 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.29 | 32.42 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.29 | 32.42 |
| HORVU2Hr1G077670.3 | Barley | nucleus | 45.02 | 31.83 |
Protein Annotations
| EntrezGene:100170698 | MapMan:15.5.8 | Gene3D:3.30.40.10 | EMBL:ACUP02004733 | InterPro:Alfin | EnsemblPlantsGene:GLYMA_07G271400 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 | GO:GO:0046872 | InterPro:IPR013083 |
| InterPro:IPR019787 | UniProt:K7L425 | EnsemblPlants:KRH51269 | ProteinID:KRH51269 | ProteinID:KRH51269.1 | PFAM:PF00628 |
| PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF60 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI00023C5FF0 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:44388269..44394222
Molecular Weight (calculated)
28264.3 Da
IEP (calculated)
4.989
GRAVY (calculated)
-0.655
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVPHPIPR TVEEVFTDFK GRRAGLIKAL TTDVEKFYQQ CDPEKENLCL YGFPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDS
101: WLLAVAFYFG ARFGFGKNER KRLFQMINDL PTIFELVTGS AKQLKDQPAA HNNGSKCKSS GKSHQSESQA KGMKMSAPPK EEDESGEEEE DDEQGATCGA
201: CGDNYGTDEF WICCDMCERW FHGKCVKITP AKAEHIKQYK CPSCSNKRVR V
101: WLLAVAFYFG ARFGFGKNER KRLFQMINDL PTIFELVTGS AKQLKDQPAA HNNGSKCKSS GKSHQSESQA KGMKMSAPPK EEDESGEEEE DDEQGATCGA
201: CGDNYGTDEF WICCDMCERW FHGKCVKITP AKAEHIKQYK CPSCSNKRVR V
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.