Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23260 | Soybean | nucleus | 89.77 | 32.11 |
| KRH10063 | Soybean | nucleus | 84.09 | 29.84 |
| KRH06119 | Soybean | nucleus | 82.95 | 28.85 |
| KRH47546 | Soybean | nucleus | 82.95 | 28.85 |
| KRH05401 | Soybean | endoplasmic reticulum, nucleus, plastid | 75.0 | 26.61 |
| KRH15616 | Soybean | nucleus | 77.27 | 26.56 |
| KRH19253 | Soybean | nucleus | 73.86 | 25.9 |
| KRH37475 | Soybean | nucleus | 72.73 | 25.81 |
| KRH02655 | Soybean | nucleus | 73.86 | 25.79 |
| KRH62601 | Soybean | cytosol | 40.91 | 23.23 |
| KRH51269 | Soybean | nucleus | 64.77 | 22.71 |
| KRH01887 | Soybean | nucleus | 63.64 | 22.22 |
| KRH38049 | Soybean | nucleus | 54.55 | 20.17 |
| KRH65724 | Soybean | nucleus | 54.55 | 20.08 |
| KRH00242 | Soybean | nucleus | 52.27 | 19.25 |
| KRH49390 | Soybean | nucleus | 52.27 | 19.25 |
| KRH69940 | Soybean | peroxisome | 47.73 | 19.09 |
| KRH56367 | Soybean | peroxisome | 46.59 | 18.64 |
| KRH61563 | Soybean | cytosol | 46.59 | 18.64 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 29.55 | 11.87 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 29.55 | 11.87 |
| GSMUA_Achr10P... | Banana | extracellular | 15.91 | 9.72 |
| KRH71913 | Soybean | cytosol | 9.09 | 8.42 |
Protein Annotations
| MapMan:15.5.8 | EMBL:ACUP02007544 | InterPro:Alfin | EnsemblPlantsGene:GLYMA_12G153100 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042393 | UniProt:K7LV30 |
| EnsemblPlants:KRH26115 | ProteinID:KRH26115 | ProteinID:KRH26115.1 | PFAM:PF12165 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 |
| TMHMM:TMhelix | UniParc:UPI0002956C79 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:23334339..23334800
Molecular Weight (calculated)
10053.0 Da
IEP (calculated)
10.022
GRAVY (calculated)
-0.180
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MQEKDWLSLV VVHSDTWLLA LAFYFGARFG FDKTHRNRLF SMINELPTIF EVVTSAAKKQ VKEKSSVSNN SGSKSKSRSN LYDFISCI
001: MEGGTAHYSP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKQNLC LYGFPNEVWE VNLPAEEVPP ELPEPALGIN FARDGMQERN WLSLVAVHSD
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMVSLM LSFNKIQNIN YELRTNQILY
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMVSLM LSFNKIQNIN YELRTNQILY
Arabidopsis Description
AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.