CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g01630.t01	Wine grape	plastid	30.45	66.34
KRH15616	Soybean	nucleus	65.45	56.25
KRH19253	Soybean	nucleus	61.82	54.18
KRH02655	Soybean	nucleus	61.36	53.57
KRH37475	Soybean	nucleus	60.0	53.23
KRH10063	Soybean	nucleus	59.55	52.82
KRH23260	Soybean	nucleus	58.18	52.03
KRH47546	Soybean	nucleus	59.55	51.78
KRH06119	Soybean	nucleus	59.55	51.78
KRH05401	Soybean	endoplasmic reticulum, nucleus, plastid	54.09	47.98
KRH49390	Soybean	nucleus	51.36	47.28
KRH26115	Soybean	endoplasmic reticulum, extracellular	18.64	46.59
KRH00242	Soybean	nucleus	50.45	46.44
KRH01887	Soybean	nucleus	52.27	45.63
KRH51269	Soybean	nucleus	51.82	45.42
KRH38049	Soybean	nucleus	49.09	45.38
KRH65724	Soybean	nucleus	49.09	45.19
Os07t0608400-01	Rice	nucleus	55.0	43.53
TraesCS2D01G179400.2	Wheat	nucleus	53.18	42.86
TraesCS2B01G198500.2	Wheat	nucleus	53.18	42.86
TraesCS2A01G172100.2	Wheat	nucleus	53.18	42.86
GSMUA_Achr10P...	Banana	nucleus	47.27	41.27
KRH56367	Soybean	peroxisome	39.55	39.55
EER97523	Sorghum	nucleus	48.18	39.41
KRH69940	Soybean	peroxisome	39.09	39.09
HORVU2Hr1G031990.2	Barley	nucleus	52.73	38.28
KRH71913	Soybean	cytosol	15.45	35.79
Zm00001d022110_P002	Maize	nucleus	48.18	33.65
GSMUA_AchrUn_...	Banana	nucleus	45.45	33.11
KRH62601	Soybean	cytosol	22.73	32.26
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	29.09	29.22
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	29.09	29.22

Protein Annotations

MapMan:15.5.8	Gene3D:3.30.40.10	UniProt:A0A0R0K9Y0	EMBL:ACUP02002171	InterPro:Alfin	EnsemblPlantsGene:GLYMA_04G054700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042393	GO:GO:0046872	InterPro:IPR013083
InterPro:IPR019787	EnsemblPlants:KRH61563	ProteinID:KRH61563	ProteinID:KRH61563.1	PFAM:PF00628	PFAM:PF12165
PANTHER:PTHR12321	PANTHER:PTHR12321:SF65	SMART:SM00249	SUPFAM:SSF57903	UniParc:UPI00023C0390	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:4427216..4428892

Molecular Weight (calculated)

24920.3 Da

IEP (calculated)

5.413

GRAVY (calculated)

-0.788

Length

220 amino acids

Sequence
(BLAST)

001: MEMEAGGAQS QRYNYNYDYN PCSVITSVIQ LCDTKMENLF LYGFPRELWE VNVPPDLLVP TLGINFDRDG KQNKDWLSLV AMHSDAWKQL FDVINDLPTI
101: NEVVTGMTKK QGKEKSSVPN HSKPKSNSKR GSKPQGKYSK AMQSKDEDED DLEVDDEEEH GETLCGTCGL NYAGEASEFS ICCDNCDKWF HGKCVKITPA
201: RVEGIKRYKC PSWSSKRARP

Best Arabidopsis Sequence Match ( AT3G42790.1 )
(BLAST)

001: MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA

Arabidopsis Description

AL3AL3 [Source:UniProtKB/TrEMBL;Acc:A0A178VCG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.