Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56367 | Soybean | peroxisome | 81.94 | 57.73 |
| KRH69940 | Soybean | peroxisome | 81.29 | 57.27 |
| KRH71913 | Soybean | cytosol | 32.26 | 52.63 |
| KRH49390 | Soybean | nucleus | 68.39 | 44.35 |
| Zm00001d044178_P001 | Maize | cytosol | 26.45 | 44.09 |
| KRH00242 | Soybean | nucleus | 67.74 | 43.93 |
| KRH65724 | Soybean | nucleus | 67.1 | 43.51 |
| KRH38049 | Soybean | nucleus | 66.45 | 43.28 |
| KRH26115 | Soybean | endoplasmic reticulum, extracellular | 23.23 | 40.91 |
| Zm00001d009466_P001 | Maize | cytosol | 25.16 | 40.21 |
| Zm00001d028496_P001 | Maize | cytosol | 25.81 | 39.6 |
| Zm00001d036294_P001 | Maize | plastid | 30.97 | 37.21 |
| KRH51269 | Soybean | nucleus | 56.77 | 35.06 |
| KRH01887 | Soybean | nucleus | 56.13 | 34.52 |
| KRH10063 | Soybean | nucleus | 53.55 | 33.47 |
| KRH06119 | Soybean | nucleus | 54.19 | 33.2 |
| KRH47546 | Soybean | nucleus | 54.19 | 33.2 |
| KRH37475 | Soybean | nucleus | 52.9 | 33.06 |
| KRH19253 | Soybean | nucleus | 52.9 | 32.67 |
| KRH23260 | Soybean | nucleus | 51.61 | 32.52 |
| KRH02655 | Soybean | nucleus | 52.26 | 32.14 |
| KRH15616 | Soybean | nucleus | 52.26 | 31.64 |
| KRH05401 | Soybean | endoplasmic reticulum, nucleus, plastid | 37.42 | 23.39 |
| KRH61563 | Soybean | cytosol | 32.26 | 22.73 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 27.74 | 19.63 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 27.74 | 19.63 |
Protein Annotations
| EMBL:ACUP02002323 | EnsemblPlants:KRH62601 | EnsemblPlantsGene:GLYMA_04G118600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042393 | InterPro:Alfin | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF96 | PFAM:PF12165 | ProteinID:KRH62601 |
| ProteinID:KRH62601.1 | UniParc:UPI000233A536 | UniProt:A0A0R0KC88 | MapMan:15.5.8 | : | : |
Description
hypothetical protein
Coordinates
chr4:+:14027978..14029755
Molecular Weight (calculated)
17863.2 Da
IEP (calculated)
5.921
GRAVY (calculated)
-0.279
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNPHTVEE IFKDYSARRI VAIRALTHDV DKLYELYDSG KDNLCLYGHS NKVWEVTLPL EEVPANLPEP TLEINFARDD VSRKDWISLV AMHSDSWLLS
101: LAFYFGFHLN HNERKRLFGL INTLSTIFQF VTNNKPIKDM PTIVSGSKFW GSTED
101: LAFYFGFHLN HNERKRLFGL INTLSTIFQF VTNNKPIKDM PTIVSGSKFW GSTED
001: MAAAAVSSNP RTVEEIFKDY SARRAALLRA LTKDVDDFYS QCDPEKENLC LYGHPNESWE VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD
101: CWLLSVSFYF GARLNRNERK RLFSLINDLP TLFDVVTGRK AMKDNKPSSD SGSKSRNGTK RSIDGQTKSS TPKLMEESYE EEEEEDEHGD TLCGSCGGHY
201: TNEEFWICCD VCERWYHGKC VKITPAKAES IKQYKCPPCC AKKGRQ
101: CWLLSVSFYF GARLNRNERK RLFSLINDLP TLFDVVTGRK AMKDNKPSSD SGSKSRNGTK RSIDGQTKSS TPKLMEESYE EEEEEDEHGD TLCGSCGGHY
201: TNEEFWICCD VCERWYHGKC VKITPAKAES IKQYKCPPCC AKKGRQ
Arabidopsis Description
AL2PHD finger protein ALFIN-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.