Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G11200.1 | KRH01887 | AT1G14510.1 | 21798944 |
| AT3G11200.1 | KRH51269 | AT1G14510.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56367 | Soybean | peroxisome | 96.82 | 96.82 |
| KRH62601 | Soybean | cytosol | 57.27 | 81.29 |
| KRH65724 | Soybean | nucleus | 75.0 | 69.04 |
| KRH38049 | Soybean | nucleus | 74.55 | 68.91 |
| KRH49390 | Soybean | nucleus | 74.55 | 68.62 |
| KRH00242 | Soybean | nucleus | 74.55 | 68.62 |
| PGSC0003DMT400059399 | Potato | nucleus | 70.91 | 64.73 |
| PGSC0003DMT400049364 | Potato | nucleus | 68.18 | 62.5 |
| AT5G05610.1 | Thale cress | nucleus | 66.82 | 61.0 |
| CDX73886 | Canola | nucleus | 67.73 | 60.82 |
| CDY00726 | Canola | nucleus | 66.82 | 60.0 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 65.91 | 59.92 |
| AT3G11200.1 | Thale cress | nucleus | 66.82 | 59.76 |
| Bra034169.1-P | Field mustard | nucleus | 67.73 | 59.6 |
| CDY08544 | Canola | nucleus | 66.82 | 59.51 |
| Bra034860.1-P | Field mustard | nucleus | 66.82 | 59.51 |
| CDY36305 | Canola | cytosol | 67.27 | 59.2 |
| GSMUA_Achr10P... | Banana | nucleus | 65.0 | 59.09 |
| CDY01002 | Canola | nucleus | 66.82 | 58.8 |
| PGSC0003DMT400028638 | Potato | nucleus | 64.09 | 58.75 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 64.55 | 58.68 |
| CDX98851 | Canola | nucleus | 63.18 | 57.92 |
| CDX70142 | Canola | cytosol | 63.18 | 57.92 |
| Bra009121.1-P | Field mustard | nucleus | 62.73 | 57.5 |
| KRH71913 | Soybean | cytosol | 24.55 | 56.84 |
| Solyc06g051420.2.1 | Tomato | nucleus | 63.18 | 56.73 |
| Os07t0233300-01 | Rice | nucleus | 62.73 | 56.56 |
| Os03t0818300-01 | Rice | nucleus | 63.18 | 56.28 |
| Bra001393.1-P | Field mustard | nucleus | 62.73 | 55.2 |
| EES00286 | Sorghum | nucleus | 59.55 | 54.13 |
| Zm00001d005185_P001 | Maize | nucleus | 58.64 | 53.53 |
| OQU88744 | Sorghum | cytosol | 58.64 | 53.31 |
| HORVU2Hr1G052960.2 | Barley | cytosol | 59.55 | 53.25 |
| EER90633 | Sorghum | nucleus | 59.55 | 52.4 |
| Zm00001d034627_P002 | Maize | nucleus | 59.55 | 52.4 |
| KRH10063 | Soybean | nucleus | 58.64 | 52.02 |
| TraesCS5D01G486400.2 | Wheat | nucleus | 59.09 | 51.79 |
| OQU77499 | Sorghum | nucleus | 59.55 | 51.78 |
| KRH51269 | Soybean | nucleus | 58.64 | 51.39 |
| TraesCS5B01G486600.1 | Wheat | nucleus | 58.64 | 51.39 |
| KRH23260 | Soybean | nucleus | 57.27 | 51.22 |
| KRH01887 | Soybean | nucleus | 58.64 | 51.19 |
| Zm00001d010834_P001 | Maize | nucleus | 58.64 | 50.99 |
| KRH37475 | Soybean | nucleus | 57.27 | 50.81 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 65.91 | 50.35 |
| KRH06119 | Soybean | nucleus | 57.27 | 49.8 |
| KRH47546 | Soybean | nucleus | 57.27 | 49.8 |
| TraesCS1D01G111700.1 | Wheat | nucleus | 57.73 | 49.42 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 57.73 | 49.42 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 57.73 | 49.42 |
| KRH15616 | Soybean | nucleus | 57.27 | 49.22 |
| KRH19253 | Soybean | nucleus | 55.91 | 49.0 |
| KRH02655 | Soybean | nucleus | 55.0 | 48.02 |
| KRH26115 | Soybean | endoplasmic reticulum, extracellular | 19.09 | 47.73 |
| Zm00001d037537_P001 | Maize | nucleus | 55.91 | 47.67 |
| OQU88643 | Sorghum | extracellular, golgi, mitochondrion | 25.91 | 47.11 |
| HORVU5Hr1G112420.6 | Barley | nucleus | 53.64 | 42.91 |
| KRH05401 | Soybean | endoplasmic reticulum, nucleus, plastid | 45.45 | 40.32 |
| KRH61563 | Soybean | cytosol | 39.09 | 39.09 |
| HORVU1Hr1G024210.1 | Barley | nucleus | 57.73 | 37.46 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 32.27 | 32.42 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 32.27 | 32.42 |
| Os05t0163100-01 | Rice | nucleus | 33.18 | 27.44 |
| HORVU5Hr1G059130.2 | Barley | nucleus | 16.82 | 24.67 |
Protein Annotations
| EntrezGene:100817101 | MapMan:15.5.8 | Gene3D:3.30.40.10 | UniProt:A0A0R0L1U1 | EMBL:ACUP02000739 | InterPro:Alfin |
| EnsemblPlantsGene:GLYMA_02G058300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 | GO:GO:0046872 |
| InterPro:IPR013083 | InterPro:IPR019787 | EnsemblPlants:KRH69940 | ProteinID:KRH69940 | ProteinID:KRH69940.1 | PFAM:PF00628 |
| PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF96 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI00023BDD2D | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:5224377..5226877
Molecular Weight (calculated)
25076.1 Da
IEP (calculated)
7.711
GRAVY (calculated)
-0.331
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKPGTVEE IFKDYSARRI AIIRALTHDV DKLYGLCDPG KENLCLYGHP NKAWEVTLPS EEVPPELPEP TLGINFARDD VSRRDWISLV AVHSDSWLLS
101: LAFYLGIRLN HNERKRLFGL INILPTIFQV VTDNKPIKDN PTMDSGSKFR GNTEVVAVRN EHIQIFCGSC GGNYNKDEFW IGCDICEWWY HGKCIMMTPT
201: KGETLKHYKC ASCSLRRGRL
101: LAFYLGIRLN HNERKRLFGL INILPTIFQV VTDNKPIKDN PTMDSGSKFR GNTEVVAVRN EHIQIFCGSC GGNYNKDEFW IGCDICEWWY HGKCIMMTPT
201: KGETLKHYKC ASCSLRRGRL
001: MEGITHPIPR TVEEVFSDFR GRRAGLIKAL TNDMVKFYQT CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS
101: WLLSVAFYFG ARFGFGKNER KRLFQMINEL PTIFEVVSGN AKQSKDLSVN NNNSKSKPSG VKVAKMSSPP PKEEEEEEDE SEDESEDDEQ GAVCGACGDN
201: YGTDEFWICC DACEKWFHGK CVKITPAKAE HIKHYKCPTC SNKRARP
101: WLLSVAFYFG ARFGFGKNER KRLFQMINEL PTIFEVVSGN AKQSKDLSVN NNNSKSKPSG VKVAKMSSPP PKEEEEEEDE SEDESEDDEQ GAVCGACGDN
201: YGTDEFWICC DACEKWFHGK CVKITPAKAE HIKHYKCPTC SNKRARP
Arabidopsis Description
AL6AL6 [Source:UniProtKB/TrEMBL;Acc:A0A178VQJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.