CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15616	Soybean	nucleus	83.47	80.86
KRH26115	Soybean	endoplasmic reticulum, extracellular	26.61	75.0
KRH19253	Soybean	nucleus	74.6	73.71
KRH37475	Soybean	nucleus	72.98	72.98
KRH06119	Soybean	nucleus	73.39	71.94
KRH47546	Soybean	nucleus	73.39	71.94
KRH02655	Soybean	nucleus	72.98	71.83
Solyc12g096040.1.1	Tomato	nucleus	72.58	70.87
KRH23260	Soybean	nucleus	67.34	67.89
KRH10063	Soybean	nucleus	67.74	67.74
Zm00001d049006_P001	Maize	plastid	32.66	61.83
KRH01887	Soybean	nucleus	62.1	61.11
KRH51269	Soybean	nucleus	61.69	60.96
Zm00001d049007_P001	Maize	cytosol	27.02	56.78
KRH00242	Soybean	nucleus	53.23	55.23
KRH49390	Soybean	nucleus	52.82	54.81
KRH38049	Soybean	nucleus	52.02	54.2
KRH61563	Soybean	cytosol	47.98	54.09
KRH65724	Soybean	nucleus	52.02	53.97
KRH71913	Soybean	cytosol	19.76	51.58
KRH56367	Soybean	peroxisome	41.53	46.82
KRH69940	Soybean	peroxisome	40.32	45.45
KRH62601	Soybean	cytosol	23.39	37.42
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	23.79	26.94
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	23.79	26.94

Protein Annotations

EntrezGene:100797908	MapMan:15.5.8	Gene3D:3.30.40.10	UniProt:A0A0R0FQK5	EMBL:ACUP02010733	EMBL:ACUP02010734
InterPro:Alfin	EnsemblPlantsGene:GLYMA_17G225200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0042393	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787
EnsemblPlants:KRH05401	ProteinID:KRH05401	ProteinID:KRH05401.1	PFAM:PF00628	PFAM:PF12165	ScanProsite:PS01359
PFscan:PS50016	PANTHER:PTHR12321	PANTHER:PTHR12321:SF65	SMART:SM00249	SUPFAM:SSF57903	TMHMM:TMhelix
UniParc:UPI0006EE0B33	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:37810638..37816106

Molecular Weight (calculated)

28398.6 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.524

Length

248 amino acids

Sequence
(BLAST)

001: MDAGYNPRTV EEVFRDFKGR RAALIKALTT DVEEFYQQCD PELHLVGHNI MLDFICILDS FRIIVLILNP PEKYEYDMMW NEKDWLSLVA VHSDAWLLAV
101: AFYFGARFGF DKADRKRLFN MINDLPTIFE VVTGMAKKQG KEKSSVSNHS STKSKSNSKR GSESKYTKAM QSKDEDDEGV GVEEEDEDEH GETLCGACGE
201: SYAADEFWIC CDICEKWFHG KCVKITPARA EHIKQYKCPS CSNKRARP

Best Arabidopsis Sequence Match ( AT1G14510.1 )
(BLAST)

001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA

Arabidopsis Description

AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.