CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
plastid 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15616	Soybean	nucleus	88.42	32.81
KRH62601	Soybean	cytosol	52.63	32.26
KRH37475	Soybean	nucleus	83.16	31.85
KRH47546	Soybean	nucleus	83.16	31.23
KRH06119	Soybean	nucleus	83.16	31.23
GSMUA_Achr8P30680_001	Banana	nucleus	82.11	31.08
KRH19253	Soybean	nucleus	80.0	30.28
KRH02655	Soybean	nucleus	78.95	29.76
KRH51269	Soybean	nucleus	76.84	29.08
KRH01887	Soybean	nucleus	76.84	28.97
AT3G42790.1	Thale cress	nucleus	75.79	28.8
Bra034950.1-P	Field mustard	nucleus	75.79	28.35
CDY12340	Canola	cytosol, nucleus, plastid	75.79	28.35
CDY70751	Canola	cytosol	75.79	28.35
Bra020107.1-P	Field mustard	cytosol	75.79	28.35
CDY16540	Canola	cytosol	77.89	28.24
CDX92458	Canola	cytosol, nucleus, plastid	75.79	28.02
CDX87962	Canola	cytosol, nucleus, plastid	74.74	27.95
KRH23260	Soybean	nucleus	71.58	27.64
AT5G20510.1	Thale cress	cytosol	74.74	27.31
KRH10063	Soybean	nucleus	70.53	27.02
Bra002307.1-P	Field mustard	nucleus	76.84	25.89
KRH00242	Soybean	nucleus	62.11	24.69
KRH56367	Soybean	peroxisome	56.84	24.55
KRH69940	Soybean	peroxisome	56.84	24.55
KRH38049	Soybean	nucleus	61.05	24.37
KRH49390	Soybean	nucleus	61.05	24.27
KRH65724	Soybean	nucleus	61.05	24.27
KRH05401	Soybean	endoplasmic reticulum, nucleus, plastid	51.58	19.76
KRH61563	Soybean	cytosol	35.79	15.45
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	22.11	9.59
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	22.11	9.59
KRH26115	Soybean	endoplasmic reticulum, extracellular	8.42	9.09
CDY51845	Canola	cytosol	1.05	1.43
Bra006562.1-P	Field mustard	cytosol	1.05	1.43

Protein Annotations

EMBL:ACUP02001111	EnsemblPlants:KRH71913	EnsemblPlantsGene:GLYMA_02G177400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0042393	InterPro:Alfin	PANTHER:PTHR12321	PANTHER:PTHR12321:SF65	PFAM:PF12165	ProteinID:KRH71913
ProteinID:KRH71913.1	UniParc:UPI0002952113	UniProt:K7K966	MapMan:15.5.8	:	:

Description

hypothetical protein

Coordinates

chr2:+:29511215..29513357

Molecular Weight (calculated)

10864.9 Da

IEP (calculated)

4.059

GRAVY (calculated)

-0.415

Length

95 amino acids

Sequence
(BLAST)

1: MDAGYNPCTV EEVFRDFKGR KVALIKALTT DVEEFYPQCD PEKENLCLYG FPSEQWEVNL LAEEVPPKLP EPALGINFAR DGMQEKDWIF GCCTQ

Best Arabidopsis Sequence Match ( AT5G20510.3 )
(BLAST)

001: MEGGTAHYSP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKQNLC LYGFPNEVWE VNLPAEEVPP ELPEPALGIN FARDGMQERN WLSLVAVHSD
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMVSLM LSFNKIQNIN YELRTNQILY

Arabidopsis Description

AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.