Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12340 | Canola | cytosol, nucleus, plastid | 83.2 | 81.89 |
| Bra034950.1-P | Field mustard | nucleus | 82.8 | 81.5 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 82.4 | 81.1 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 78.0 | 77.38 |
| KRH71913 | Soybean | cytosol | 28.8 | 75.79 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 75.6 | 75.3 |
| AT5G26210.1 | Thale cress | nucleus | 76.4 | 74.9 |
| AT5G20510.1 | Thale cress | cytosol | 76.0 | 73.08 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 69.2 | 67.58 |
| AT1G14510.1 | Thale cress | nucleus | 68.0 | 67.46 |
| Os07t0608400-01 | Rice | nucleus | 73.6 | 66.19 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 26.0 | 64.36 |
| AT5G05610.1 | Thale cress | nucleus | 61.6 | 63.9 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 69.2 | 63.37 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 69.2 | 63.37 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 69.2 | 63.37 |
| AT3G11200.1 | Thale cress | nucleus | 62.0 | 63.01 |
| EER97523 | Sorghum | nucleus | 66.8 | 62.08 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 69.2 | 57.1 |
| Zm00001d022110_P002 | Maize | nucleus | 66.4 | 52.7 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.4 | 32.42 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.4 | 32.42 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | PDB:5YC3 | PDB:5YC4 | EntrezGene:823316 | UniProt:A0A178VCG6 |
| ProteinID:AEE77752.1 | Symbol:AL3 | ArrayExpress:AT3G42790 | EnsemblPlantsGene:AT3G42790 | RefSeq:AT3G42790 | TAIR:AT3G42790 |
| RefSeq:AT3G42790-TAIR-G | EnsemblPlants:AT3G42790.1 | TAIR:AT3G42790.1 | EMBL:AY062851 | EMBL:AY114574 | InterPro:Alfin |
| Unigene:At.27212 | ProteinID:CAB87196.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016569 | GO:GO:0042393 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | RefSeq:NP_189865.1 |
| ProteinID:OAP03616.1 | PFAM:PF00628 | PFAM:PF12165 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 | UniProt:Q9M2B4 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI00000AA30A | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
AL3AL3 [Source:UniProtKB/TrEMBL;Acc:A0A178VCG6]
Coordinates
chr3:-:14877890..14879792
Molecular Weight (calculated)
28215.9 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.730
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.