Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96851 | Canola | cytosol | 88.89 | 89.6 |
| CDX84026 | Canola | nucleus | 88.89 | 89.6 |
| Bra016698.1-P | Field mustard | cytosol | 88.89 | 89.6 |
| CDX81645 | Canola | cytosol | 84.92 | 88.07 |
| CDY53545 | Canola | cytosol | 84.13 | 87.24 |
| Bra026825.1-P | Field mustard | nucleus | 84.13 | 86.89 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 84.92 | 83.59 |
| KRH01887 | Soybean | nucleus | 82.14 | 82.14 |
| KRH51269 | Soybean | nucleus | 81.75 | 82.07 |
| Solyc01g102750.2.1 | Tomato | nucleus | 78.97 | 79.92 |
| Solyc01g102760.2.1 | Tomato | nucleus | 78.57 | 79.84 |
| PGSC0003DMT400047018 | Potato | nucleus | 78.57 | 79.84 |
| VIT_12s0035g01980.t01 | Wine grape | nucleus | 79.76 | 79.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.9 | 76.86 |
| GSMUA_Achr10P... | Banana | nucleus | 72.22 | 71.65 |
| Zm00001d010241_P002 | Maize | cytosol | 45.63 | 70.99 |
| EES08261 | Sorghum | nucleus | 71.43 | 70.87 |
| Os11t0244800-01 | Rice | nucleus | 71.03 | 70.47 |
| GSMUA_Achr2P05660_001 | Banana | nucleus | 70.63 | 70.36 |
| GSMUA_Achr3P16750_001 | Banana | nucleus | 70.63 | 70.36 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 70.63 | 70.08 |
| TraesCS4D01G085300.1 | Wheat | peroxisome | 70.24 | 69.69 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 70.24 | 69.69 |
| AT5G26210.1 | Thale cress | nucleus | 70.24 | 69.41 |
| HORVU4Hr1G015060.3 | Barley | nucleus | 69.44 | 68.9 |
| GSMUA_Achr7P02940_001 | Banana | nucleus | 68.65 | 68.38 |
| AT3G42790.1 | Thale cress | nucleus | 67.46 | 68.0 |
| GSMUA_Achr6P28820_001 | Banana | nucleus | 68.25 | 67.98 |
| GSMUA_Achr8P32300_001 | Banana | nucleus | 68.65 | 67.58 |
| GSMUA_Achr11P... | Banana | nucleus | 67.46 | 67.46 |
| EES18243 | Sorghum | nucleus | 67.46 | 66.15 |
| Zm00001d038208_P001 | Maize | nucleus | 67.06 | 66.02 |
| Os05t0419100-01 | Rice | nucleus | 67.46 | 65.89 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 68.25 | 65.4 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 68.25 | 65.4 |
| AT5G05610.1 | Thale cress | nucleus | 62.3 | 65.15 |
| TraesCS3D01G398800.2 | Wheat | cytosol | 67.86 | 65.02 |
| OQU78932 | Sorghum | nucleus | 66.67 | 64.86 |
| EES05274 | Sorghum | nucleus | 65.87 | 64.84 |
| KXG33847 | Sorghum | nucleus | 65.08 | 64.06 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 55.56 | 63.93 |
| TraesCS1D01G262200.1 | Wheat | peroxisome | 66.27 | 63.74 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 66.27 | 63.5 |
| AT5G20510.1 | Thale cress | cytosol | 65.48 | 63.46 |
| HORVU1Hr1G064250.4 | Barley | mitochondrion, nucleus, peroxisome | 66.27 | 63.26 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 64.29 | 63.03 |
| Os01t0887700-01 | Rice | nucleus | 67.46 | 62.5 |
| Zm00001d041767_P002 | Maize | nucleus | 65.48 | 62.26 |
| Os02t0564100-01 | Rice | nucleus | 65.87 | 62.17 |
| AT3G11200.1 | Thale cress | nucleus | 60.32 | 61.79 |
| Os04t0444900-01 | Rice | nucleus | 61.51 | 60.55 |
| KXG26388 | Sorghum | cytosol | 59.92 | 60.4 |
| GSMUA_AchrUn_... | Banana | plastid | 30.56 | 60.16 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 65.48 | 58.51 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 65.87 | 57.84 |
| Zm00001d012196_P005 | Maize | nucleus | 63.89 | 56.1 |
| Zm00001d023962_P001 | Maize | nucleus | 66.27 | 54.22 |
| HORVU3Hr1G090540.1 | Barley | nucleus | 68.25 | 49.14 |
| Zm00001d025504_P001 | Maize | nucleus | 47.62 | 48.39 |
| GSMUA_Achr10P... | Banana | nucleus | 44.84 | 43.46 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 43.65 | 38.87 |
| TraesCS2D01G311200.1 | Wheat | nucleus | 43.25 | 38.52 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 43.25 | 38.52 |
| Zm00001d025491_P002 | Maize | nucleus | 50.4 | 34.89 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.97 | 33.33 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.97 | 33.33 |
| HORVU2Hr1G077670.3 | Barley | nucleus | 43.65 | 30.99 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | EntrezGene:838013 | UniProt:A0A178WNG6 | ProteinID:AAF43952.1 | ProteinID:AAF63181.1 |
| ProteinID:AEE29173.1 | EMBL:AK228067 | Symbol:AL7 | ArrayExpress:AT1G14510 | EnsemblPlantsGene:AT1G14510 | RefSeq:AT1G14510 |
| TAIR:AT1G14510 | RefSeq:AT1G14510-TAIR-G | EnsemblPlants:AT1G14510.1 | TAIR:AT1G14510.1 | EMBL:AY088087 | InterPro:Alfin |
| EMBL:BT006199 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 |
| GO:GO:0035064 | GO:GO:0042393 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | RefSeq:NP_172903.1 |
| ProteinID:OAP19809.1 | PFAM:PF00628 | PFAM:PF12165 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF60 | UniProt:Q8LA16 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI00000A2C72 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
Coordinates
chr1:-:4961594..4964515
Molecular Weight (calculated)
28287.2 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.728
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.