Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70142 | Canola | cytosol | 89.21 | 89.58 |
| Bra009121.1-P | Field mustard | nucleus | 88.8 | 89.17 |
| CDX98851 | Canola | nucleus | 88.38 | 88.75 |
| AT3G11200.1 | Thale cress | nucleus | 87.55 | 85.77 |
| PGSC0003DMT400059399 | Potato | nucleus | 80.08 | 80.08 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 80.08 | 79.42 |
| KRH65724 | Soybean | nucleus | 77.18 | 77.82 |
| KRH38049 | Soybean | nucleus | 76.35 | 77.31 |
| KRH49390 | Soybean | nucleus | 75.1 | 75.73 |
| PGSC0003DMT400049364 | Potato | nucleus | 74.69 | 75.0 |
| KRH00242 | Soybean | nucleus | 74.27 | 74.9 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 73.86 | 73.55 |
| GSMUA_Achr10P... | Banana | nucleus | 73.03 | 72.73 |
| PGSC0003DMT400028638 | Potato | nucleus | 72.2 | 72.5 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 72.61 | 72.31 |
| Solyc06g051420.2.1 | Tomato | nucleus | 70.12 | 68.98 |
| KRH56367 | Soybean | peroxisome | 61.83 | 67.73 |
| Os07t0233300-01 | Rice | nucleus | 68.46 | 67.62 |
| KRH69940 | Soybean | peroxisome | 61.0 | 66.82 |
| OQU88744 | Sorghum | cytosol | 65.56 | 65.29 |
| HORVU2Hr1G052960.2 | Barley | cytosol | 66.39 | 65.04 |
| Zm00001d005185_P001 | Maize | nucleus | 63.49 | 63.49 |
| EER90633 | Sorghum | nucleus | 65.56 | 63.2 |
| Zm00001d034627_P002 | Maize | nucleus | 65.56 | 63.2 |
| Os03t0818300-01 | Rice | nucleus | 64.32 | 62.75 |
| AT1G14510.1 | Thale cress | nucleus | 65.15 | 62.3 |
| EES00286 | Sorghum | nucleus | 62.24 | 61.98 |
| AT3G42790.1 | Thale cress | nucleus | 63.9 | 61.6 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 64.32 | 60.55 |
| Zm00001d010834_P001 | Maize | nucleus | 63.49 | 60.47 |
| OQU77499 | Sorghum | nucleus | 63.07 | 60.08 |
| AT5G26210.1 | Thale cress | nucleus | 63.49 | 60.0 |
| TraesCS5D01G486400.2 | Wheat | nucleus | 62.24 | 59.76 |
| TraesCS5B01G486600.1 | Wheat | nucleus | 61.83 | 59.36 |
| AT5G20510.1 | Thale cress | cytosol | 63.49 | 58.85 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 61.41 | 57.59 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 61.0 | 57.2 |
| TraesCS1D01G111700.1 | Wheat | nucleus | 61.0 | 57.2 |
| Zm00001d037537_P001 | Maize | nucleus | 59.34 | 55.43 |
| OQU88643 | Sorghum | extracellular, golgi, mitochondrion | 26.97 | 53.72 |
| HORVU5Hr1G112420.6 | Barley | nucleus | 58.09 | 50.91 |
| HORVU1Hr1G024210.1 | Barley | nucleus | 61.0 | 43.36 |
| Os05t0163100-01 | Rice | nucleus | 39.0 | 35.34 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.22 | 31.05 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.22 | 31.05 |
| HORVU5Hr1G059130.2 | Barley | nucleus | 19.09 | 30.67 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | PDB:5Y20 | EntrezGene:830444 | UniProt:A0A178UPZ2 | ProteinID:AED90898.1 |
| ProteinID:AED90899.1 | EMBL:AK176462 | EMBL:AK176806 | Symbol:AL1 | ArrayExpress:AT5G05610 | EnsemblPlantsGene:AT5G05610 |
| RefSeq:AT5G05610 | TAIR:AT5G05610 | RefSeq:AT5G05610-TAIR-G | EnsemblPlants:AT5G05610.1 | TAIR:AT5G05610.1 | EMBL:AY084560 |
| InterPro:Alfin | Unigene:At.43821 | ProteinID:BAB11550.1 | EMBL:BT024471 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0035064 |
| GO:GO:0042393 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 |
| RefSeq:NP_196180.1 | RefSeq:NP_850775.1 | ProteinID:OAO95062.1 | PFAM:PF00628 | PFAM:PF12165 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01359 |
| PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF96 | UniProt:Q9FFF5 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI000005EB83 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
Coordinates
chr5:-:1676889..1679107
Molecular Weight (calculated)
27224.2 Da
IEP (calculated)
5.773
GRAVY (calculated)
-0.623
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.