Factsheet for Bra009121.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70142	Canola	cytosol	99.58	99.58
AT5G05610.1	Thale cress	nucleus	89.17	88.8
Bra034860.1-P	Field mustard	nucleus	80.0	77.73
Bra034169.1-P	Field mustard	nucleus	80.42	77.2
PGSC0003DMT400059399	Potato	nucleus	72.92	72.61
Bra001393.1-P	Field mustard	nucleus	75.42	72.4
VIT_08s0105g00360.t01	Wine grape	nucleus	72.92	72.02
KRH65724	Soybean	nucleus	70.42	70.71
KRH38049	Soybean	nucleus	70.0	70.59
PGSC0003DMT400049364	Potato	nucleus	68.75	68.75
KRH00242	Soybean	nucleus	68.33	68.62
KRH49390	Soybean	nucleus	68.33	68.62
GSMUA_Achr7P15530_001	Banana	nucleus	67.92	67.36
PGSC0003DMT400028638	Potato	nucleus	66.67	66.67
GSMUA_Achr10P...	Banana	nucleus	67.08	66.53
GSMUA_Achr2P18960_001	Banana	nucleus	66.25	65.7
Solyc06g051420.2.1	Tomato	nucleus	66.25	64.9
Bra006562.1-P	Field mustard	cytosol	18.75	64.29
KRH56367	Soybean	peroxisome	57.92	63.18
KRH69940	Soybean	peroxisome	57.5	62.73
Os07t0233300-01	Rice	nucleus	62.92	61.89
OQU88744	Sorghum	cytosol	60.42	59.92
HORVU2Hr1G052960.2	Barley	cytosol	60.83	59.35
Bra024817.1-P	Field mustard	nucleus	60.0	58.54
Zm00001d005185_P001	Maize	nucleus	58.75	58.51
Os03t0818300-01	Rice	nucleus	60.0	58.3
Zm00001d034627_P002	Maize	nucleus	60.42	58.0
EER90633	Sorghum	nucleus	60.42	58.0
Bra017415.1-P	Field mustard	cytosol, nucleus, plastid	58.75	57.79
EES00286	Sorghum	nucleus	57.92	57.44
Zm00001d010834_P001	Maize	nucleus	59.58	56.52
OQU77499	Sorghum	nucleus	59.58	56.52
Bra034950.1-P	Field mustard	nucleus	59.58	56.3
TraesCS5B01G486600.1	Wheat	nucleus	58.75	56.18
TraesCS5D01G486400.2	Wheat	nucleus	58.75	56.18
Bra026825.1-P	Field mustard	nucleus	57.08	56.15
Bra036568.1-P	Field mustard	cytosol	60.0	56.03
Bra020107.1-P	Field mustard	cytosol	59.17	55.91
Bra020543.1-P	Field mustard	cytosol, nucleus, plastid	58.75	55.51
TraesCS1D01G111700.1	Wheat	nucleus	58.75	54.86
TraesCS1A01G110200.1	Wheat	nucleus	58.75	54.86
TraesCS1B01G129400.1	Wheat	nucleus	58.75	54.86
Bra016698.1-P	Field mustard	cytosol	57.08	54.8
Bra009887.1-P	Field mustard	nucleus	59.17	54.41
Bra026210.1-P	Field mustard	nucleus	55.42	53.2
Zm00001d037537_P001	Maize	nucleus	56.67	52.71
OQU88643	Sorghum	extracellular, golgi, mitochondrion	25.42	50.41
Bra002307.1-P	Field mustard	nucleus	58.33	49.65
HORVU5Hr1G112420.6	Barley	nucleus	55.42	48.36
HORVU1Hr1G024210.1	Barley	nucleus	58.75	41.59
Bra005861.1-P	Field mustard	mitochondrion	29.17	38.46
Os05t0163100-01	Rice	nucleus	35.42	31.95
HORVU5Hr1G059130.2	Barley	nucleus	19.17	30.67
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	27.92	30.59
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	27.92	30.59

Protein Annotations

MapMan:15.5.8	Gene3D:3.30.40.10	InterPro:Alfin	EnsemblPlantsGene:Bra009121	EnsemblPlants:Bra009121.1	EnsemblPlants:Bra009121.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0035064	GO:GO:0042393	GO:GO:0043565
GO:GO:0044212	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787	UniProt:M4CY24	PFAM:PF00628
PFAM:PF12165	ScanProsite:PS01359	PFscan:PS50016	PANTHER:PTHR12321	PANTHER:PTHR12321:SF96	SMART:SM00249
SUPFAM:SSF57903	UniParc:UPI0002544C49	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

AT5G05610 (E=6e-108) AL1 | AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding

Coordinates

chrA10:-:15318004..15319391

Molecular Weight (calculated)

27308.4 Da

IEP (calculated)

5.425

GRAVY (calculated)

-0.561

Length

240 amino acids

Sequence
(BLAST)

001: MAGESSNPGT VEEIFKDFRG RRSAFLQALS VDVDKFYSLC NPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRQDWL SLVAVHSDCW
101: LLSVSSYFGA RLSRNEKNRL FSLINDLPTL FEVVTGRKTI KDKPSMDHES KYQNGLKRSI EGEMKITRKL MEESCEDEED EHGDTLCGSC GGHYLNVEFW
201: ICCDVCERWY HGKCVKITPA KAESMKQYKC PSCCTKKGRQ

Best Arabidopsis Sequence Match ( AT5G05610.1 )
(BLAST)

001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q

Arabidopsis Description

AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.