Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77499 | Sorghum | nucleus | 94.47 | 94.47 |
| Zm00001d037537_P001 | Maize | nucleus | 91.3 | 89.53 |
| TraesCS1D01G111700.1 | Wheat | nucleus | 86.56 | 85.21 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 86.56 | 85.21 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 86.56 | 85.21 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 68.77 | 71.9 |
| GSMUA_Achr10P... | Banana | nucleus | 67.98 | 71.07 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 67.59 | 70.66 |
| VIT_13s0067g01000.t01 | Wine grape | nucleus | 66.01 | 69.29 |
| Solyc09g005360.2.1 | Tomato | nucleus | 66.01 | 69.29 |
| KRH38049 | Soybean | nucleus | 64.82 | 68.91 |
| PGSC0003DMT400059399 | Potato | nucleus | 65.61 | 68.88 |
| KRH00242 | Soybean | nucleus | 64.82 | 68.62 |
| KRH65724 | Soybean | nucleus | 64.43 | 68.2 |
| KRH49390 | Soybean | nucleus | 64.43 | 68.2 |
| Solyc10g076690.1.1 | Tomato | nucleus | 63.24 | 66.67 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 63.64 | 66.26 |
| PGSC0003DMT400049364 | Potato | nucleus | 62.85 | 66.25 |
| Zm00001d049007_P001 | Maize | cytosol | 30.83 | 66.1 |
| PGSC0003DMT400028638 | Potato | nucleus | 61.66 | 65.0 |
| Solyc10g085180.1.1 | Tomato | nucleus | 61.66 | 65.0 |
| HORVU1Hr1G024210.1 | Barley | nucleus | 86.96 | 64.9 |
| AT5G05610.1 | Thale cress | nucleus | 60.47 | 63.49 |
| CDX73886 | Canola | nucleus | 61.26 | 63.27 |
| CDY00726 | Canola | nucleus | 60.87 | 62.86 |
| CDY08544 | Canola | nucleus | 61.26 | 62.75 |
| Bra034860.1-P | Field mustard | nucleus | 61.26 | 62.75 |
| Zm00001d010241_P002 | Maize | cytosol | 39.92 | 62.35 |
| AT3G11200.1 | Thale cress | nucleus | 60.47 | 62.2 |
| Bra034169.1-P | Field mustard | nucleus | 61.26 | 62.0 |
| CDY36305 | Canola | cytosol | 60.87 | 61.6 |
| CDY01002 | Canola | nucleus | 60.87 | 61.6 |
| KRH56367 | Soybean | peroxisome | 52.96 | 60.91 |
| Zm00001d005185_P001 | Maize | nucleus | 57.31 | 60.17 |
| CDX70142 | Canola | cytosol | 56.92 | 60.0 |
| Solyc06g051420.2.1 | Tomato | nucleus | 57.71 | 59.59 |
| Bra009121.1-P | Field mustard | nucleus | 56.52 | 59.58 |
| KRH69940 | Soybean | peroxisome | 50.99 | 58.64 |
| Bra001393.1-P | Field mustard | nucleus | 57.71 | 58.4 |
| Zm00001d034627_P002 | Maize | nucleus | 57.71 | 58.4 |
| CDX98851 | Canola | nucleus | 55.34 | 58.33 |
| Zm00001d038208_P001 | Maize | nucleus | 56.52 | 55.86 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 56.52 | 55.64 |
| Zm00001d041767_P002 | Maize | nucleus | 54.94 | 52.45 |
| Os05t0163100-01 | Rice | nucleus | 52.96 | 50.38 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 56.13 | 50.35 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 55.34 | 48.78 |
| Zm00001d012196_P005 | Maize | nucleus | 55.34 | 48.78 |
| Zm00001d044178_P001 | Maize | cytosol | 17.79 | 48.39 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 54.55 | 47.92 |
| Zm00001d023962_P001 | Maize | nucleus | 56.13 | 46.1 |
| Zm00001d025504_P001 | Maize | nucleus | 45.06 | 45.97 |
| Zm00001d049006_P001 | Maize | plastid | 23.72 | 45.8 |
| Zm00001d009466_P001 | Maize | cytosol | 17.39 | 45.36 |
| Zm00001d028496_P001 | Maize | cytosol | 17.79 | 44.55 |
| Zm00001d022110_P002 | Maize | nucleus | 54.55 | 43.81 |
| Zm00001d036294_P001 | Maize | plastid | 21.34 | 41.86 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 30.43 | 35.16 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 30.43 | 35.16 |
| Zm00001d025491_P002 | Maize | nucleus | 47.43 | 32.97 |
Protein Annotations
| EntrezGene:100216893 | MapMan:15.5.8 | Gene3D:3.30.40.10 | ProteinID:AQK95041.1 | ProteinID:AQK95043.1 | InterPro:Alfin |
| UniProt:B4FK95 | EMBL:BT037533 | EMBL:EU954018 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042393 | GO:GO:0046872 | EMBL:HQ858738 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 |
| PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF37 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI00017B715C | InterPro:Zinc_finger_PHD-type_CS | EnsemblPlantsGene:Zm00001d010834 | EnsemblPlants:Zm00001d010834_P001 | EnsemblPlants:Zm00001d010834_T001 |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | : | : |
Description
Alfin-like-transcription factor 9PHD finger protein ALFIN-LIKE 2
Coordinates
chr8:+:129331385..129334443
Molecular Weight (calculated)
28404.1 Da
IEP (calculated)
5.255
GRAVY (calculated)
-0.676
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MDASYRRAGT GSGSAPRSVE DIYKDYRSRR SAILRALTHD VEEFYALCDP EKENLCLYGY ANEAWEVALP AEEVPTELPE PALGINFARD GMNRGDWLAL
101: VAVHSDSWLV SVAFYYAARL NRSDRKRLFG MMNDLPTVFE VVSSGVKQSK ERDRSGTDNG GRNKLSVKQT SEPRLENNAR EPDEGYDEDD SNHSETLCGT
201: CGGIYSADEF WIGCDVCEKW YHGKCVKITP AKAESIKQYK CPSCCNSKRP RPI
101: VAVHSDSWLV SVAFYYAARL NRSDRKRLFG MMNDLPTVFE VVSSGVKQSK ERDRSGTDNG GRNKLSVKQT SEPRLENNAR EPDEGYDEDD SNHSETLCGT
201: CGGIYSADEF WIGCDVCEKW YHGKCVKITP AKAESIKQYK CPSCCNSKRP RPI
001: MAAESSNPRT VEEIFKDFSG RRSGFLRALS VDVDKFYSLC DPEMENLCLY GHPNGTWEVN LPAEEVPPEL PEPALGINFA RDGMQRKDWL SLVAVHSDCW
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
101: LLSVSSYFGA RLNRNERKRL FSLINDLPTL FEVVTGRKPI KDGKPSMDLG SKSRNGVKRS IEGQTKSTPK LMEESYEDED DEHGDTLCGS CGGNYTNDEF
201: WICCDVCERW YHGKCVKITP AKAESIKQYK CPSCCTKKGR Q
Arabidopsis Description
AL1AL1 [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.