Factsheet for Zm00001d049007_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010241_P002	Maize	cytosol	86.44	62.96
Zm00001d044178_P001	Maize	cytosol	48.31	61.29
Zm00001d009466_P001	Maize	cytosol	49.15	59.79
Zm00001d028496_P001	Maize	cytosol	49.15	57.43
Zm00001d036294_P001	Maize	plastid	55.08	50.39
Zm00001d038208_P001	Maize	nucleus	87.29	40.23
VIT_09s0002g01600.t01	Wine grape	nucleus	88.14	39.85
Zm00001d041767_P002	Maize	nucleus	88.14	39.25
VIT_04s0008g01670.t01	Wine grape	nucleus	87.29	39.02
PGSC0003DMT400054001	Potato	nucleus	81.36	38.87
KRH06119	Soybean	nucleus	83.05	38.74
KRH47546	Soybean	nucleus	83.05	38.74
KRH15616	Soybean	nucleus	83.9	38.67
KRH23260	Soybean	nucleus	80.51	38.62
Zm00001d016861_P003	Maize	cytosol, nucleus, plastid	90.68	37.94
Zm00001d042582_P001	Maize	cytosol, mitochondrion, nucleus	82.2	37.74
KRH10063	Soybean	nucleus	78.81	37.5
Zm00001d050816_P002	Maize	cytosol, endoplasmic reticulum, nucleus	89.83	36.93
Zm00001d023962_P001	Maize	nucleus	87.29	33.44
Zm00001d012196_P005	Maize	nucleus	79.66	32.75
Zm00001d025504_P001	Maize	nucleus	68.64	32.66
Zm00001d005185_P001	Maize	nucleus	66.1	32.37
Zm00001d010834_P001	Maize	nucleus	66.1	30.83
Zm00001d037537_P001	Maize	nucleus	66.95	30.62
Zm00001d034627_P002	Maize	nucleus	64.41	30.4
Zm00001d022110_P002	Maize	nucleus	77.97	29.21
KRH05401	Soybean	endoplasmic reticulum, nucleus, plastid	56.78	27.02
Zm00001d025491_P002	Maize	nucleus	73.73	23.9
TraesCSU01G252500.1	Wheat	cytosol, nucleus, plastid	29.66	15.98
TraesCSU01G246200.1	Wheat	cytosol, nucleus, plastid	29.66	15.98
Solyc05g032760.2.1	Tomato	extracellular, nucleus	2.54	3.09
Zm00001d049006_P001	Maize	plastid	0.85	0.76

Protein Annotations

MapMan:15.5.8	UniProt:A0A1D6PRK9	ProteinID:AQK49353.1	InterPro:Alfin	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0042393	PFAM:PF12165
PANTHER:PTHR12321	PANTHER:PTHR12321:SF98	TMHMM:TMhelix	UniParc:UPI00084418A8	EnsemblPlantsGene:Zm00001d049007	EnsemblPlants:Zm00001d049007_P001
EnsemblPlants:Zm00001d049007_T001	SEG:seg	:	:	:	:

Description

Alfin-like-transcription factor 18 Alfin-like-transcription factor 18

Coordinates

chr4:-:12330907..12332675

Molecular Weight (calculated)

13425.8 Da

IEP (calculated)

4.357

GRAVY (calculated)

-0.472

Length

118 amino acids

Sequence
(BLAST)

001: MDGGGTHRTP EDVFRDFRAR RAGMIKALTT DVEKFYQQCD PEKENLCLYG LPNETWEVNL PAEEVPPELP EPALGINFAR DGMDEKDWLS LVAVHSDAWL
101: LAVAFYFGAR FGFDKESR

Best Arabidopsis Sequence Match ( AT1G14510.1 )
(BLAST)

001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA

Arabidopsis Description

AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.