Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73886 | Canola | nucleus | 93.9 | 94.29 |
| CDY00726 | Canola | nucleus | 93.5 | 93.88 |
| Bra034169.1-P | Field mustard | nucleus | 93.9 | 92.4 |
| CDY36305 | Canola | cytosol | 93.5 | 92.0 |
| CDY08544 | Canola | nucleus | 92.28 | 91.9 |
| Bra034860.1-P | Field mustard | nucleus | 92.28 | 91.9 |
| CDY01002 | Canola | nucleus | 92.68 | 91.2 |
| AT5G05610.1 | Thale cress | nucleus | 85.77 | 87.55 |
| Bra001393.1-P | Field mustard | nucleus | 87.8 | 86.4 |
| PGSC0003DMT400059399 | Potato | nucleus | 78.46 | 80.08 |
| VIT_08s0105g00360.t01 | Wine grape | nucleus | 77.24 | 78.19 |
| KRH38049 | Soybean | nucleus | 75.2 | 77.73 |
| KRH49390 | Soybean | nucleus | 74.8 | 76.99 |
| KRH65724 | Soybean | nucleus | 74.8 | 76.99 |
| KRH00242 | Soybean | nucleus | 74.39 | 76.57 |
| PGSC0003DMT400049364 | Potato | nucleus | 73.58 | 75.42 |
| GSMUA_Achr7P15530_001 | Banana | nucleus | 73.98 | 75.21 |
| GSMUA_Achr10P... | Banana | nucleus | 73.17 | 74.38 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 86.18 | 73.61 |
| GSMUA_Achr2P18960_001 | Banana | nucleus | 72.36 | 73.55 |
| PGSC0003DMT400028638 | Potato | nucleus | 71.14 | 72.92 |
| Solyc06g051420.2.1 | Tomato | nucleus | 70.33 | 70.61 |
| Os07t0233300-01 | Rice | nucleus | 67.89 | 68.44 |
| KRH56367 | Soybean | peroxisome | 60.57 | 67.73 |
| KRH69940 | Soybean | peroxisome | 59.76 | 66.82 |
| OQU88744 | Sorghum | cytosol | 65.45 | 66.53 |
| Zm00001d005185_P001 | Maize | nucleus | 64.63 | 65.98 |
| HORVU2Hr1G052960.2 | Barley | cytosol | 65.85 | 65.85 |
| Zm00001d034627_P002 | Maize | nucleus | 65.85 | 64.8 |
| Os03t0818300-01 | Rice | nucleus | 65.04 | 64.78 |
| EES00286 | Sorghum | nucleus | 62.6 | 63.64 |
| EER90633 | Sorghum | nucleus | 64.63 | 63.6 |
| AT3G42790.1 | Thale cress | nucleus | 63.01 | 62.0 |
| TraesCS5B01G486600.1 | Wheat | nucleus | 63.01 | 61.75 |
| TraesCS5D01G486400.2 | Wheat | nucleus | 62.6 | 61.35 |
| OQU77499 | Sorghum | nucleus | 62.6 | 60.87 |
| Zm00001d010834_P001 | Maize | nucleus | 62.2 | 60.47 |
| AT1G14510.1 | Thale cress | nucleus | 61.79 | 60.32 |
| AT5G26210.1 | Thale cress | nucleus | 62.2 | 60.0 |
| TraesCS1A01G110200.1 | Wheat | nucleus | 62.6 | 59.92 |
| TraesCS1B01G129400.1 | Wheat | nucleus | 62.6 | 59.92 |
| TraesCS1D01G111700.1 | Wheat | nucleus | 62.6 | 59.92 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 61.38 | 58.98 |
| AT5G20510.1 | Thale cress | cytosol | 62.2 | 58.85 |
| Zm00001d037537_P001 | Maize | nucleus | 59.35 | 56.59 |
| OQU88643 | Sorghum | extracellular, golgi, mitochondrion | 26.42 | 53.72 |
| HORVU5Hr1G112420.6 | Barley | nucleus | 56.91 | 50.91 |
| HORVU1Hr1G024210.1 | Barley | nucleus | 62.6 | 45.43 |
| Os05t0163100-01 | Rice | nucleus | 37.8 | 34.96 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.46 | 31.96 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.46 | 31.96 |
| HORVU5Hr1G059130.2 | Barley | nucleus | 18.7 | 30.67 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | EntrezGene:820290 | UniProt:A0A178VG14 | ProteinID:AAF01506.1 | ProteinID:AAG50986.1 |
| ProteinID:AEE75012.1 | Symbol:AL2 | ArrayExpress:AT3G11200 | EnsemblPlantsGene:AT3G11200 | RefSeq:AT3G11200 | TAIR:AT3G11200 |
| RefSeq:AT3G11200-TAIR-G | EnsemblPlants:AT3G11200.1 | TAIR:AT3G11200.1 | EMBL:AY058833 | EMBL:AY085138 | EMBL:AY143832 |
| InterPro:Alfin | Unigene:At.17411 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0042393 | GO:GO:0046872 | InterPro:IPR013083 |
| InterPro:IPR019787 | RefSeq:NP_187729.1 | ProteinID:OAP03953.1 | PFAM:PF00628 | PFAM:PF12165 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 |
| PANTHER:PTHR12321:SF96 | UniProt:Q9SRM4 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI00000AC71D | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
AL2PHD finger protein ALFIN-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRM4]
Coordinates
chr3:-:3507996..3510658
Molecular Weight (calculated)
27833.6 Da
IEP (calculated)
5.464
GRAVY (calculated)
-0.714
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAVSSNP RTVEEIFKDY SARRAALLRA LTKDVDDFYS QCDPEKENLC LYGHPNESWE VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD
101: CWLLSVSFYF GARLNRNERK RLFSLINDLP TLFDVVTGRK AMKDNKPSSD SGSKSRNGTK RSIDGQTKSS TPKLMEESYE EEEEEDEHGD TLCGSCGGHY
201: TNEEFWICCD VCERWYHGKC VKITPAKAES IKQYKCPPCC AKKGRQ
101: CWLLSVSFYF GARLNRNERK RLFSLINDLP TLFDVVTGRK AMKDNKPSSD SGSKSRNGTK RSIDGQTKSS TPKLMEESYE EEEEEDEHGD TLCGSCGGHY
201: TNEEFWICCD VCERWYHGKC VKITPAKAES IKQYKCPPCC AKKGRQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.