Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
19621931
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05274 | Sorghum | nucleus | 85.02 | 88.67 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 82.4 | 78.01 |
| CDY17594 | Canola | cytosol | 34.46 | 77.97 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 82.4 | 76.66 |
| Os11t0244800-01 | Rice | nucleus | 70.79 | 74.41 |
| Os04t0444900-01 | Rice | nucleus | 69.29 | 72.27 |
| Solyc01g102750.2.1 | Tomato | nucleus | 66.29 | 71.08 |
| PGSC0003DMT400047018 | Potato | nucleus | 65.92 | 70.97 |
| Solyc01g102760.2.1 | Tomato | nucleus | 64.79 | 69.76 |
| VIT_12s0035g01980.t01 | Wine grape | nucleus | 65.54 | 69.17 |
| KRH51269 | Soybean | nucleus | 64.42 | 68.53 |
| KRH01887 | Soybean | nucleus | 64.42 | 68.25 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 61.8 | 67.62 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 61.8 | 67.62 |
| Bra017415.1-P | Field mustard | cytosol, nucleus, plastid | 61.8 | 67.62 |
| Os05t0419100-01 | Rice | nucleus | 65.17 | 67.44 |
| Os01t0887700-01 | Rice | nucleus | 67.79 | 66.54 |
| AT2G02470.1 | Thale cress | cytosol, nucleus, plastid | 63.67 | 66.41 |
| AT1G14510.1 | Thale cress | nucleus | 62.17 | 65.87 |
| Bra024817.1-P | Field mustard | nucleus | 60.67 | 65.85 |
| CDY53545 | Canola | cytosol | 59.55 | 65.43 |
| CDY03049 | Canola | cytosol | 59.55 | 64.9 |
| Bra026825.1-P | Field mustard | nucleus | 59.18 | 64.75 |
| CDX84026 | Canola | nucleus | 60.3 | 64.4 |
| CDX81645 | Canola | cytosol | 58.43 | 64.2 |
| Bra016698.1-P | Field mustard | cytosol | 59.93 | 64.0 |
| CDX96851 | Canola | cytosol | 59.93 | 64.0 |
| Os07t0608400-01 | Rice | nucleus | 65.92 | 63.31 |
| Bra026210.1-P | Field mustard | nucleus | 57.68 | 61.6 |
| CDY65375 | Canola | nucleus | 56.18 | 61.48 |
| CDY45267 | Canola | nucleus | 45.32 | 59.31 |
| Os07t0233300-01 | Rice | nucleus | 52.81 | 57.79 |
| CDY17593 | Canola | cytosol | 25.47 | 57.63 |
| Os03t0818300-01 | Rice | nucleus | 51.31 | 55.47 |
| GSMUA_Achr10P... | Banana | nucleus | 46.82 | 48.08 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 26.59 | 32.42 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 26.59 | 32.42 |
| Os05t0163100-01 | Rice | nucleus | 28.84 | 28.95 |
| Os01t0158800-00 | Rice | plastid | 25.47 | 28.57 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | EntrezGene:9269003 | EMBL:AK073526 | EMBL:AK105951 | EMBL:AP008208 |
| InterPro:Alfin | ProteinID:BAD15587.1 | ProteinID:BAD15814.1 | ProteinID:BAS79286.1 | ProteinID:EEE57208.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0046872 | InterPro:IPR013083 |
| InterPro:IPR019787 | EnsemblPlantsGene:Os02g0564100 | EnsemblPlants:Os02t0564100-01 | PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 |
| PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 | UniProt:Q6Z7F4 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI0000358AD3 | RefSeq:XP_015625160.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Similar to EL3 protein. (Os02t0564100-01)
Coordinates
chr2:+:21413884..21417195
Molecular Weight (calculated)
29231.2 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.600
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEGGGAGAA AAAAGNAAGA AVHHNARSAE DVFRDFRARR AGIVKALTTD VEKFYRQCDP EKENLCLYGL PNETWDVTLP AEEVPPELPE PALGINFARD
101: GMIEKDWLSL VAVHSDAWLL SVAFYFGARF GFDKEARRRL FTMINGLPTV YEVVTGIAKK QTKVSNGSSK SNKSNPKPSK QSNSNSKPAK PPQPKDEEDS
201: GPEGTEDEDQ AYMCGACGET YANGEFWICC DVCEKWFHGK CVRITPAKAE HIKQYKCPGC SSKRSRE
101: GMIEKDWLSL VAVHSDAWLL SVAFYFGARF GFDKEARRRL FTMINGLPTV YEVVTGIAKK QTKVSNGSSK SNKSNPKPSK QSNSNSKPAK PPQPKDEEDS
201: GPEGTEDEDQ AYMCGACGET YANGEFWICC DVCEKWFHGK CVRITPAKAE HIKQYKCPGC SSKRSRE
001: MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC LYGLPNEEWE VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA
101: AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC
201: GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA
Arabidopsis Description
AL3AL3 [Source:UniProtKB/TrEMBL;Acc:A0A178VCG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.