Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45267 | Canola | nucleus | 78.69 | 94.12 |
| CDY17594 | Canola | cytosol | 34.84 | 72.03 |
| CDX81645 | Canola | cytosol | 71.31 | 71.6 |
| CDY53545 | Canola | cytosol | 70.49 | 70.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.84 | 70.25 |
| CDX84026 | Canola | nucleus | 71.31 | 69.6 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 68.85 | 68.85 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 68.85 | 68.85 |
| CDX96851 | Canola | cytosol | 70.49 | 68.8 |
| CDY51845 | Canola | cytosol | 19.67 | 68.57 |
| CDY03049 | Canola | cytosol | 68.85 | 68.57 |
| CDY17593 | Canola | cytosol | 32.38 | 66.95 |
| GSMUA_Achr2P05660_001 | Banana | nucleus | 66.8 | 64.43 |
| Zm00001d010241_P002 | Maize | cytosol | 42.62 | 64.2 |
| GSMUA_Achr10P... | Banana | nucleus | 66.8 | 64.17 |
| GSMUA_Achr3P16750_001 | Banana | nucleus | 65.98 | 63.64 |
| GSMUA_Achr7P02940_001 | Banana | nucleus | 65.16 | 62.85 |
| GSMUA_Achr6P28820_001 | Banana | nucleus | 64.75 | 62.45 |
| GSMUA_Achr11P... | Banana | nucleus | 63.93 | 61.9 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 64.34 | 61.81 |
| GSMUA_Achr8P32300_001 | Banana | nucleus | 64.75 | 61.72 |
| TraesCS4D01G085300.1 | Wheat | peroxisome | 63.93 | 61.42 |
| Os11t0244800-01 | Rice | nucleus | 63.93 | 61.42 |
| EES08261 | Sorghum | nucleus | 63.93 | 61.42 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 63.93 | 61.42 |
| Os05t0419100-01 | Rice | nucleus | 64.75 | 61.24 |
| EES05274 | Sorghum | nucleus | 63.93 | 60.94 |
| EES18243 | Sorghum | nucleus | 63.93 | 60.7 |
| HORVU4Hr1G015060.3 | Barley | nucleus | 63.11 | 60.63 |
| Zm00001d038208_P001 | Maize | nucleus | 63.52 | 60.55 |
| CDY52629 | Canola | nucleus | 64.75 | 60.54 |
| CDX88221 | Canola | nucleus | 64.34 | 60.15 |
| CDY19781 | Canola | cytosol | 63.11 | 59.92 |
| CDX87061 | Canola | cytosol | 63.11 | 59.92 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 61.07 | 59.6 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 61.89 | 59.45 |
| TraesCS1D01G262200.1 | Wheat | peroxisome | 63.11 | 58.78 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 63.11 | 58.56 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 52.46 | 58.45 |
| TraesCS3D01G398800.2 | Wheat | cytosol | 62.7 | 58.17 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 62.7 | 58.17 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 62.7 | 58.17 |
| OQU78932 | Sorghum | nucleus | 61.48 | 57.92 |
| CDY70751 | Canola | cytosol | 60.25 | 57.87 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 60.25 | 57.87 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 60.25 | 57.87 |
| Os04t0444900-01 | Rice | nucleus | 60.66 | 57.81 |
| HORVU1Hr1G064250.4 | Barley | mitochondrion, nucleus, peroxisome | 62.3 | 57.58 |
| KXG33847 | Sorghum | nucleus | 60.25 | 57.42 |
| KXG26388 | Sorghum | cytosol | 58.61 | 57.2 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 60.25 | 57.2 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 59.43 | 56.42 |
| Os02t0564100-01 | Rice | nucleus | 61.48 | 56.18 |
| CDY16540 | Canola | cytosol | 60.25 | 56.11 |
| Zm00001d041767_P002 | Maize | nucleus | 60.25 | 55.47 |
| GSMUA_AchrUn_... | Banana | plastid | 29.1 | 55.47 |
| CDX70142 | Canola | cytosol | 54.51 | 55.42 |
| Os01t0887700-01 | Rice | nucleus | 61.48 | 55.15 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 63.52 | 54.96 |
| CDX73886 | Canola | nucleus | 54.92 | 54.69 |
| CDX98851 | Canola | nucleus | 53.69 | 54.58 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 63.93 | 54.36 |
| CDY00726 | Canola | nucleus | 54.51 | 54.29 |
| CDY08544 | Canola | nucleus | 54.51 | 53.85 |
| CDY36305 | Canola | cytosol | 54.92 | 53.6 |
| CDY01002 | Canola | nucleus | 54.1 | 52.8 |
| Zm00001d012196_P005 | Maize | nucleus | 58.61 | 49.83 |
| Zm00001d023962_P001 | Maize | nucleus | 60.25 | 47.73 |
| Zm00001d025504_P001 | Maize | nucleus | 48.36 | 47.58 |
| HORVU3Hr1G090540.1 | Barley | nucleus | 62.7 | 43.71 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 49.59 | 42.01 |
| GSMUA_Achr10P... | Banana | nucleus | 41.8 | 39.23 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 44.26 | 38.16 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 43.85 | 37.81 |
| TraesCS2D01G311200.1 | Wheat | nucleus | 43.85 | 37.81 |
| Zm00001d025491_P002 | Maize | nucleus | 51.64 | 34.62 |
| CDX80967 | Canola | mitochondrion | 25.41 | 34.25 |
| CDY11330 | Canola | mitochondrion | 25.82 | 34.24 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 29.51 | 32.88 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 29.51 | 32.88 |
| HORVU2Hr1G077670.3 | Barley | nucleus | 41.39 | 28.45 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078JFY4 | UniProt:A0A078JFY4 | InterPro:Alfin | EnsemblPlants:CDY65375 |
| ProteinID:CDY65375 | ProteinID:CDY65375.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00045715001 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF60 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI0004EE6CCB | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g49670DBnaC05g49670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFY4]
Coordinates
chrLK034760:+:14369..16190
Molecular Weight (calculated)
27415.9 Da
IEP (calculated)
5.102
GRAVY (calculated)
-0.743
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRAAEDVF KDFRGRRAGL IKALTTDVRK FYDKCDPANE NLCLYGLPNG SWELNLPVDE VPPELPEPAL GINFSRDGMP EENWVSLIAV HSDSWLIAVA
101: FYFGARFSFD KNERMRLFRM INDLPTIFEV VTGNAKQSKD QSGNHNSSRS KSGGVKTKAS KRSPPPPREE SESGDDDGEE DDGQGEFCGV CGESDDGEEE
201: FWIWCDTCER WFHGKCVKIT PARAEHIKHY KCPSCCGANK KHRA
101: FYFGARFSFD KNERMRLFRM INDLPTIFEV VTGNAKQSKD QSGNHNSSRS KSGGVKTKAS KRSPPPPREE SESGDDDGEE DDGQGEFCGV CGESDDGEEE
201: FWIWCDTCER WFHGKCVKIT PARAEHIKHY KCPSCCGANK KHRA
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.