Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92458 | Canola | cytosol, nucleus, plastid | 94.27 | 96.11 |
| Bra002307.1-P | Field mustard | nucleus | 96.95 | 90.07 |
| CDY51845 | Canola | cytosol | 24.05 | 90.0 |
| CDY70751 | Canola | cytosol | 85.5 | 88.19 |
| AT5G20510.1 | Thale cress | cytosol | 85.11 | 85.77 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 77.1 | 80.16 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 76.72 | 79.13 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 75.95 | 78.35 |
| KRH71913 | Soybean | cytosol | 28.24 | 77.89 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 73.28 | 76.49 |
| CDY17594 | Canola | cytosol | 34.35 | 76.27 |
| CDY52629 | Canola | nucleus | 74.43 | 74.71 |
| CDX88221 | Canola | nucleus | 74.05 | 74.33 |
| CDX87061 | Canola | cytosol | 72.9 | 74.32 |
| CDY19781 | Canola | cytosol | 72.9 | 74.32 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 67.56 | 70.8 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 67.18 | 69.29 |
| Os07t0608400-01 | Rice | nucleus | 71.76 | 67.63 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 62.98 | 67.62 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 62.98 | 67.62 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 69.85 | 67.03 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 69.85 | 67.03 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 69.85 | 67.03 |
| CDX84026 | Canola | nucleus | 63.74 | 66.8 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 25.57 | 66.34 |
| CDY03049 | Canola | cytosol | 61.83 | 66.12 |
| CDX96851 | Canola | cytosol | 62.98 | 66.0 |
| CDY53545 | Canola | cytosol | 59.54 | 64.2 |
| EER97523 | Sorghum | nucleus | 65.27 | 63.57 |
| CDX81645 | Canola | cytosol | 58.78 | 63.37 |
| CDY36305 | Canola | cytosol | 60.31 | 63.2 |
| CDY08544 | Canola | nucleus | 59.54 | 63.16 |
| CDX73886 | Canola | nucleus | 58.78 | 62.86 |
| CDY00726 | Canola | nucleus | 58.78 | 62.86 |
| CDY17593 | Canola | cytosol | 28.24 | 62.71 |
| CDY01002 | Canola | nucleus | 59.16 | 62.0 |
| CDY65375 | Canola | nucleus | 56.11 | 60.25 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 69.08 | 59.74 |
| CDX70142 | Canola | cytosol | 54.58 | 59.58 |
| CDY45267 | Canola | nucleus | 46.18 | 59.31 |
| CDX98851 | Canola | nucleus | 53.44 | 58.33 |
| Zm00001d022110_P002 | Maize | nucleus | 65.27 | 54.29 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 55.73 | 50.69 |
| CDX80967 | Canola | mitochondrion | 25.57 | 37.02 |
| CDY11330 | Canola | mitochondrion | 25.19 | 35.87 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 28.63 | 34.25 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 28.63 | 34.25 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078FQ30 | UniProt:A0A078FQ30 | InterPro:Alfin | EnsemblPlants:CDY16540 |
| ProteinID:CDY16540 | ProteinID:CDY16540.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0042393 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00094321001 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 |
| PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 | SMART:SM00249 |
| SUPFAM:SSF57903 | UniParc:UPI0004EE0D8E | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
BnaC09g37330DBnaC09g37330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ30]
Coordinates
chrLK032065:-:29983..32100
Molecular Weight (calculated)
29762.7 Da
IEP (calculated)
4.695
GRAVY (calculated)
-0.756
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGGAHYN PRTVEEVFRD FKGRRAAILR ALTTDVQEFF QQCDPEKDNL CLYGFPNEVW EVNLPAEEVP PELPEPALGI NFARDGMQEK DWLSLVAVHS
101: DAWLLSVSFF FGSKFGFDKV DRKRLFNMIN EFPTIFEVVT GTAKNQTKEK PSSANQNGNR SKSNSKVRGL DGKSSKTIQA MEEEGLEEEE EEEKKEKEED
201: EEEHGETLCG ACGDNYAADE FWICCDMCEK WFHGTCVKIT PARAEHIKHY KCPSCSNKRA RP
101: DAWLLSVSFF FGSKFGFDKV DRKRLFNMIN EFPTIFEVVT GTAKNQTKEK PSSANQNGNR SKSNSKVRGL DGKSSKTIQA MEEEGLEEEE EEEKKEKEED
201: EEEHGETLCG ACGDNYAADE FWICCDMCEK WFHGTCVKIT PARAEHIKHY KCPSCSNKRA RP
001: MEGGTAHYSP RTVEEVFRDF KGRRAGIIQA LTTDVEDFFQ QCDPEKQNLC LYGFPNEVWE VNLPAEEVPP ELPEPALGIN FARDGMQERN WLSLVAVHSD
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
101: AWLLSVSFYF GSRFGFDRAD RKRLFSMINE VPTVYEVVTG NAEKQTKEMP SSANQNGNRS KSNSKMRGLE SKSSKTIHAK DEEEGLELEE GEEEEDEDED
201: EHGETLCGAC GDNYASDEFW ICCDMCEKWF HGECVKITPA RAEHIKHYKC PTCSNKRARP
Arabidopsis Description
AL5PHD finger protein ALFIN-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.