Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020543.1-P | Field mustard | cytosol, nucleus, plastid | 100.0 | 100.0 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 92.91 | 94.4 |
| CDY19781 | Canola | cytosol | 83.86 | 82.88 |
| CDX87061 | Canola | cytosol | 83.46 | 82.49 |
| AT5G26210.1 | Thale cress | nucleus | 82.28 | 81.96 |
| CDY52629 | Canola | nucleus | 83.46 | 81.23 |
| CDX88221 | Canola | nucleus | 83.46 | 81.23 |
| CDY51845 | Canola | cytosol | 22.05 | 80.0 |
| VIT_11s0016g01500.t01 | Wine grape | nucleus | 77.95 | 78.57 |
| CDY17594 | Canola | cytosol | 34.25 | 73.73 |
| GSMUA_Achr8P30680_001 | Banana | nucleus | 70.47 | 71.31 |
| CDY70751 | Canola | cytosol | 68.9 | 68.9 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 68.9 | 68.09 |
| CDY16540 | Canola | cytosol | 69.29 | 67.18 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 63.39 | 65.98 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 63.39 | 65.98 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 65.75 | 65.75 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 64.96 | 64.96 |
| TraesCS2D01G179400.2 | Wheat | nucleus | 69.29 | 64.47 |
| TraesCS2B01G198500.2 | Wheat | nucleus | 69.29 | 64.47 |
| TraesCS2A01G172100.2 | Wheat | nucleus | 69.29 | 64.47 |
| VIT_11s0016g01630.t01 | Wine grape | plastid | 25.59 | 64.36 |
| CDX84026 | Canola | nucleus | 62.6 | 63.6 |
| Os07t0608400-01 | Rice | nucleus | 69.29 | 63.31 |
| CDY45267 | Canola | nucleus | 50.79 | 63.24 |
| CDY03049 | Canola | cytosol | 60.63 | 62.86 |
| CDX96851 | Canola | cytosol | 61.81 | 62.8 |
| CDY65375 | Canola | nucleus | 59.45 | 61.89 |
| CDX81645 | Canola | cytosol | 59.06 | 61.73 |
| CDY53545 | Canola | cytosol | 58.66 | 61.32 |
| CDX73886 | Canola | nucleus | 58.66 | 60.82 |
| CDY00726 | Canola | nucleus | 58.27 | 60.41 |
| CDY08544 | Canola | nucleus | 58.27 | 59.92 |
| EER97523 | Sorghum | nucleus | 62.99 | 59.48 |
| CDY01002 | Canola | nucleus | 58.27 | 59.2 |
| CDY36305 | Canola | cytosol | 57.87 | 58.8 |
| CDX70142 | Canola | cytosol | 55.51 | 58.75 |
| CDX98851 | Canola | nucleus | 55.12 | 58.33 |
| HORVU2Hr1G031990.2 | Barley | nucleus | 68.9 | 57.76 |
| CDY17593 | Canola | cytosol | 26.77 | 57.63 |
| Zm00001d022110_P002 | Maize | nucleus | 62.6 | 50.48 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 52.76 | 46.53 |
| CDX80967 | Canola | mitochondrion | 26.38 | 37.02 |
| CDY11330 | Canola | mitochondrion | 26.38 | 36.41 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 29.13 | 33.79 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 29.13 | 33.79 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078EU21 | InterPro:Alfin | EnsemblPlants:CDY05535 | ProteinID:CDY05535 |
| ProteinID:CDY05535.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0042393 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00120476001 | InterPro:IPR013083 | InterPro:IPR019787 |
| PFAM:PF00628 | PFAM:PF12165 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF98 |
| SMART:SM00249 | SUPFAM:SSF57903 | TMHMM:TMhelix | UniParc:UPI0002546C92 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
BnaA02g31560D
Coordinates
chrLK031962:+:718526..720351
Molecular Weight (calculated)
28992.8 Da
IEP (calculated)
4.785
GRAVY (calculated)
-0.767
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRDGAYNPR TVEEVFRDYN GRRNGMIKAL TTDVHEFHRL CDPEKENLCL YGLPSEDWEV NLPAEEVPPE LPEPVLGINF ARNGMLEKDW LSLVAVHSDA
101: WLMAVAFFFG ARFGFDKADR KRLFNMVNDL PTVFEVVTDF LARKLSKEKY SVSNNSSNRS KSNSKRGGSE ARPIAKPAPK EEEEEEEEND DDDEEGDTAC
201: GACGETYARD EFWICCDMCE NWFHGKCVKI TPARAEHIKQ YKCPSCSNNK RGRS
101: WLMAVAFFFG ARFGFDKADR KRLFNMVNDL PTVFEVVTDF LARKLSKEKY SVSNNSSNRS KSNSKRGGSE ARPIAKPAPK EEEEEEEEND DDDEEGDTAC
201: GACGETYARD EFWICCDMCE NWFHGKCVKI TPARAEHIKQ YKCPSCSNNK RGRS
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.