Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026210.1-P | Field mustard | nucleus | 96.57 | 78.8 |
| CDY65375 | Canola | nucleus | 94.12 | 78.69 |
| CDY51845 | Canola | cytosol | 24.02 | 70.0 |
| CDY17593 | Canola | cytosol | 36.76 | 63.56 |
| CDX81645 | Canola | cytosol | 70.1 | 58.85 |
| CDY53545 | Canola | cytosol | 69.12 | 58.02 |
| CDX84026 | Canola | nucleus | 71.08 | 58.0 |
| TraesCS1A01G262200.1 | Wheat | peroxisome | 62.25 | 57.99 |
| CDY17436 | Canola | cytosol, nucleus, plastid | 69.12 | 57.79 |
| CDY04130 | Canola | cytosol, nucleus, plastid | 69.12 | 57.79 |
| CDX96851 | Canola | cytosol | 70.1 | 57.2 |
| CDY03049 | Canola | cytosol | 67.65 | 56.33 |
| GSMUA_AchrUn_... | Banana | plastid | 32.84 | 52.34 |
| GSMUA_Achr3P16750_001 | Banana | nucleus | 64.71 | 52.17 |
| GSMUA_Achr2P05660_001 | Banana | nucleus | 64.71 | 52.17 |
| GSMUA_Achr10P... | Banana | nucleus | 64.22 | 51.57 |
| GSMUA_Achr6P28820_001 | Banana | nucleus | 63.73 | 51.38 |
| TraesCS4B01G088200.1 | Wheat | nucleus | 63.73 | 51.18 |
| CDY24988 | Canola | cytosol, nucleus, plastid | 62.25 | 50.8 |
| CDY05535 | Canola | cytosol, nucleus, plastid | 63.24 | 50.79 |
| TraesCS4A01G227900.1 | Wheat | peroxisome | 63.24 | 50.79 |
| TraesCS4D01G085300.1 | Wheat | peroxisome | 63.24 | 50.79 |
| Os11t0244800-01 | Rice | nucleus | 63.24 | 50.79 |
| EES08261 | Sorghum | nucleus | 62.75 | 50.39 |
| GSMUA_Achr7P02940_001 | Banana | nucleus | 62.25 | 50.2 |
| CDX87061 | Canola | cytosol | 63.24 | 50.19 |
| CDY17594 | Canola | cytosol | 28.92 | 50.0 |
| Os05t0419100-01 | Rice | nucleus | 63.24 | 50.0 |
| EES05274 | Sorghum | nucleus | 62.75 | 50.0 |
| HORVU4Hr1G015060.3 | Barley | nucleus | 62.25 | 50.0 |
| GSMUA_Achr11P... | Banana | nucleus | 61.76 | 50.0 |
| CDY52629 | Canola | nucleus | 63.73 | 49.81 |
| CDX88221 | Canola | nucleus | 63.73 | 49.81 |
| CDY19781 | Canola | cytosol | 62.75 | 49.81 |
| EES18243 | Sorghum | nucleus | 62.75 | 49.81 |
| GSMUA_Achr8P32300_001 | Banana | nucleus | 62.25 | 49.61 |
| Zm00001d038208_P001 | Maize | nucleus | 61.76 | 49.22 |
| TraesCS1D01G262200.1 | Wheat | peroxisome | 62.75 | 48.85 |
| TraesCS1B01G272800.3 | Wheat | peroxisome | 62.75 | 48.67 |
| OQU78932 | Sorghum | nucleus | 61.27 | 48.26 |
| KXG33847 | Sorghum | nucleus | 60.29 | 48.05 |
| Os04t0444900-01 | Rice | nucleus | 60.29 | 48.05 |
| TraesCS3A01G403600.1 | Wheat | cytosol | 61.76 | 47.91 |
| TraesCS3B01G437100.1 | Wheat | cytosol | 61.76 | 47.91 |
| TraesCS3D01G398800.2 | Wheat | cytosol | 61.76 | 47.91 |
| CDY70751 | Canola | cytosol | 59.31 | 47.64 |
| CDY12340 | Canola | cytosol, nucleus, plastid | 59.31 | 47.64 |
| CDX87962 | Canola | cytosol, nucleus, plastid | 59.31 | 47.64 |
| Zm00001d010241_P002 | Maize | cytosol | 37.75 | 47.53 |
| HORVU1Hr1G064250.4 | Barley | mitochondrion, nucleus, peroxisome | 61.27 | 47.35 |
| KXG26388 | Sorghum | cytosol | 57.84 | 47.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.94 | 47.11 |
| Zm00001d042582_P001 | Maize | cytosol, mitochondrion, nucleus | 59.31 | 47.08 |
| CDX70142 | Canola | cytosol | 54.9 | 46.67 |
| CDX98851 | Canola | nucleus | 54.9 | 46.67 |
| CDX73886 | Canola | nucleus | 55.88 | 46.53 |
| CDX92458 | Canola | cytosol, nucleus, plastid | 58.33 | 46.3 |
| CDY16540 | Canola | cytosol | 59.31 | 46.18 |
| CDY00726 | Canola | nucleus | 55.39 | 46.12 |
| Zm00001d041767_P002 | Maize | nucleus | 59.8 | 46.04 |
| CDY08544 | Canola | nucleus | 55.39 | 45.75 |
| Os02t0564100-01 | Rice | nucleus | 59.31 | 45.32 |
| Zm00001d016861_P003 | Maize | cytosol, nucleus, plastid | 62.25 | 45.04 |
| CDY36305 | Canola | cytosol | 54.9 | 44.8 |
| CDY01002 | Canola | nucleus | 54.9 | 44.8 |
| Zm00001d050816_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 62.25 | 44.25 |
| Os01t0887700-01 | Rice | nucleus | 58.82 | 44.12 |
| Zm00001d012196_P005 | Maize | nucleus | 58.33 | 41.46 |
| Zm00001d023962_P001 | Maize | nucleus | 60.29 | 39.94 |
| Zm00001d025504_P001 | Maize | nucleus | 45.59 | 37.5 |
| HORVU3Hr1G090540.1 | Barley | nucleus | 61.76 | 36.0 |
| CDY36322 | Canola | cytosol, plasma membrane, plastid | 49.02 | 34.72 |
| TraesCSU01G246200.1 | Wheat | cytosol, nucleus, plastid | 34.8 | 32.42 |
| TraesCSU01G252500.1 | Wheat | cytosol, nucleus, plastid | 34.8 | 32.42 |
| TraesCS2A01G312700.1 | Wheat | nucleus | 42.16 | 30.39 |
| TraesCS2D01G311200.1 | Wheat | nucleus | 41.67 | 30.04 |
| TraesCS2B01G329700.1 | Wheat | nucleus | 41.67 | 30.04 |
| GSMUA_Achr10P... | Banana | nucleus | 36.27 | 28.46 |
| Zm00001d025491_P002 | Maize | nucleus | 48.53 | 27.2 |
| CDX80967 | Canola | mitochondrion | 22.55 | 25.41 |
| CDY11330 | Canola | mitochondrion | 22.55 | 25.0 |
| HORVU2Hr1G077670.3 | Barley | nucleus | 42.65 | 24.51 |
Protein Annotations
| MapMan:15.5.8 | Gene3D:3.30.40.10 | GO:A0A078I5B4 | UniProt:A0A078I5B4 | InterPro:Alfin | EnsemblPlants:CDY45267 |
| ProteinID:CDY45267 | ProteinID:CDY45267.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0042393 |
| GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00081709001 | InterPro:IPR013083 | InterPro:IPR019787 | PFAM:PF00628 | PFAM:PF12165 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR12321 | PANTHER:PTHR12321:SF60 | SMART:SM00249 | SUPFAM:SSF57903 |
| UniParc:UPI0004EDE93E | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g09370DBnaA06g09370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5B4]
Coordinates
chrLK032619:-:43665..44673
Molecular Weight (calculated)
22635.2 Da
IEP (calculated)
4.496
GRAVY (calculated)
-0.651
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MCAANENLCL YGLPNGSWEL NLPVDEVPPE LPEPALGINF SRDGMPEENW VSLIAVHSDS WLIAVAFYFG ARFSFDKNER LFKMINDLPT IFEVVTGNAK
101: QSKDQSANSG RSKSGGAAKR SPPPPPTREE SESGDDDGEE DEGQGEFCGV CGESDDGEEE FWIWCDTCER WFHGKCVKIT PARAEHIKHY KCPSCCGSNK
201: KHRA
101: QSKDQSANSG RSKSGGAAKR SPPPPPTREE SESGDDDGEE DEGQGEFCGV CGESDDGEEE FWIWCDTCER WFHGKCVKIT PARAEHIKHY KCPSCCGSNK
201: KHRA
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.