CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005861.1-P	Field mustard	mitochondrion	97.28	98.35
CDX80967	Canola	mitochondrion	89.13	90.61
CDY17594	Canola	cytosol	31.52	49.15
GSMUA_Achr10P...	Banana	cytosol	26.09	32.0
GSMUA_Achr10P...	Banana	cytosol	29.89	30.39
CDX70142	Canola	cytosol	38.59	29.58
CDY08544	Canola	nucleus	39.13	29.15
CDX73886	Canola	nucleus	38.59	28.98
CDY01002	Canola	nucleus	39.13	28.8
CDX98851	Canola	nucleus	37.5	28.75
CDY04130	Canola	cytosol, nucleus, plastid	38.04	28.69
CDY17436	Canola	cytosol, nucleus, plastid	38.04	28.69
CDY00726	Canola	nucleus	38.04	28.57
CDY36305	Canola	cytosol	38.59	28.4
CDY53545	Canola	cytosol	37.5	28.4
CDX81645	Canola	cytosol	37.5	28.4
CDY03049	Canola	cytosol	36.41	27.35
CDX96851	Canola	cytosol	36.96	27.2
CDX84026	Canola	nucleus	36.96	27.2
CDY19781	Canola	cytosol	37.5	26.85
CDX87061	Canola	cytosol	36.96	26.46
CDY52629	Canola	nucleus	37.5	26.44
CDY24988	Canola	cytosol, nucleus, plastid	35.87	26.4
CDY05535	Canola	cytosol, nucleus, plastid	36.41	26.38
CDX88221	Canola	nucleus	36.96	26.05
CDY65375	Canola	nucleus	34.24	25.82
CDX92458	Canola	cytosol, nucleus, plastid	35.87	25.68
CDX87962	Canola	cytosol, nucleus, plastid	35.33	25.59
CDY12340	Canola	cytosol, nucleus, plastid	35.33	25.59
CDY70751	Canola	cytosol	35.33	25.59
CDY16540	Canola	cytosol	35.87	25.19
GSMUA_Achr10P...	Banana	cytosol	26.09	25.13
CDY36322	Canola	cytosol, plasma membrane, plastid	39.13	25.0
GSMUA_Achr10P...	Banana	cytosol	25.0	23.83
CDY45267	Canola	nucleus	25.0	22.55
Os01t0158800-00	Rice	plastid	28.26	21.85
CDY17593	Canola	cytosol	5.43	8.47
CDY51845	Canola	cytosol	2.17	5.71

Protein Annotations

MapMan:15.5.8	GO:A0A078FA85	UniProt:A0A078FA85	InterPro:Alfin	EnsemblPlants:CDY11330	ProteinID:CDY11330
ProteinID:CDY11330.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0042393
EnsemblPlantsGene:GSBRNA2T00049376001	PFAM:PF12165	PANTHER:PTHR12321	PANTHER:PTHR12321:SF60	UniParc:UPI0004EE177B	SEG:seg

Description

BnaA03g01660DBnaA03g01660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA85]

Coordinates

chrLK032010:-:808338..809520

Molecular Weight (calculated)

21161.3 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.347

Length

184 amino acids

Sequence
(BLAST)

001: MFRRVVPSSS SSSAQNRDML RRVTTSSPLI RDDYIPRTVE HIFINYRLRR VGLLRAFGTD VGTLYNLCDP GYKENLSLYG YPDGTWDVQE ARMLLPPNLP
101: EPTVGINLAR DRMRAIDWVT VVAEHCDSWL LSLAFLFGVD LSHDDSRERL FERINGLPTL AEKVKEYYPG QLIQSRIQQA NLEN

Best Arabidopsis Sequence Match ( AT1G14510.1 )
(BLAST)

001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA

Arabidopsis Description

AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.