Factsheet for GSMUA_Achr10P04390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
extracellular 1
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	66.84	86.0
GSMUA_AchrUn_...	Banana	cytosol	35.75	57.02
GSMUA_Achr10P...	Banana	cytosol	51.3	51.83
GSMUA_Achr10P...	Banana	cytosol	47.67	50.83
GSMUA_Achr7P02940_001	Banana	nucleus	38.86	29.64
GSMUA_Achr10P...	Banana	nucleus	38.34	29.13
GSMUA_Achr8P30680_001	Banana	nucleus	37.82	29.08
GSMUA_Achr11P...	Banana	nucleus	37.82	28.97
GSMUA_Achr8P32300_001	Banana	nucleus	37.31	28.12
GSMUA_Achr3P16750_001	Banana	nucleus	36.79	28.06
GSMUA_Achr2P05660_001	Banana	nucleus	36.79	28.06
GSMUA_Achr6P28820_001	Banana	nucleus	36.27	27.67
GSMUA_Achr10P...	Banana	nucleus	36.79	27.31
CDX80967	Canola	mitochondrion	24.35	25.97
Bra005861.1-P	Field mustard	mitochondrion	23.83	25.27
GSMUA_Achr2P18960_001	Banana	nucleus	31.61	25.21
GSMUA_Achr10P...	Banana	nucleus	31.61	25.21
GSMUA_Achr7P15530_001	Banana	nucleus	31.61	25.21
GSMUA_Achr10P...	Banana	nucleus	32.64	25.0
GSMUA_Achr10P...	Banana	nucleus	29.53	25.0
CDY11330	Canola	mitochondrion	23.83	25.0
GSMUA_AchrUn_...	Banana	nucleus	31.09	19.87
Os01t0158800-00	Rice	plastid	20.73	16.81
GSMUA_Achr10P...	Banana	nucleus	2.59	8.93
GSMUA_Achr10P...	Banana	extracellular	4.66	6.25
GSMUA_AchrUn_...	Banana	plastid	1.55	2.34

Protein Annotations

MapMan:15.5.8	InterPro:Alfin	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0042393	EnsemblPlantsGene:GSMUA_Achr10G04390_001	EnsemblPlants:GSMUA_Achr10P04390_001	EnsemblPlants:GSMUA_Achr10T04390_001
UniProt:M0RFB6	PFAM:PF12165	PANTHER:PTHR12321	PANTHER:PTHR12321:SF77	TMHMM:TMhelix	UniParc:UPI000295CDDC

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G04390_001]

Coordinates

chr10:+:14062895..14064347

Molecular Weight (calculated)

22557.2 Da

IEP (calculated)

4.818

GRAVY (calculated)

0.163

Length

193 amino acids

Sequence
(BLAST)

001: MDLNGRPITS WTIDMLFRDF LGRRAGLIKA LTTDFIKFYE QCDPEKPYMC LYGYPNETWE VKEAPVVPHE FPEPSLGVNF AKDEMKLKDW IAHIAIHSDI
101: WIYSYAFYIA ARAGFDNETR DSYDFLVFNF SFGFDVAGVR GCYGYGSACS LCRPIAFMII MWLSVLASIT MNNFDFLFFI YKELFRLLSI WVY

Best Arabidopsis Sequence Match ( AT2G02470.3 )
(BLAST)

001: MEGITHPIPR TVEEVFSDFR GRRAGLIKAL TNDMVKFYQT CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW VSLVAVHSDS
101: WLLSVAFYFG ARFGFGKNER KRLFQMINEL PTIFEVVSGN AKQSKDLSVN NNNSKSKPSG VKVSLLFHHF VLSISAKFYL FVFLTNSLAN PNLSQRLQRC
201: HLHRQKKKKK KKMRVKMRVK TMNKVRFVVL VETTTVQMSS GFAATRVRNG SMENV

Arabidopsis Description

AL6AL6 [Source:UniProtKB/TrEMBL;Acc:A0A178VQJ7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.