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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 42.06 87.6
CDY17594 Canola cytosol 38.1 81.36
GSMUA_Achr7P02940_001 Banana nucleus 80.95 80.63
GSMUA_Achr8P32300_001 Banana nucleus 80.16 78.91
GSMUA_Achr6P28820_001 Banana nucleus 78.57 78.26
GSMUA_Achr10P... Banana nucleus 78.17 77.56
GSMUA_Achr2P05660_001 Banana nucleus 76.98 76.68
GSMUA_Achr3P16750_001 Banana nucleus 76.59 76.28
KRH01887 Soybean nucleus 73.81 73.81
GSMUA_AchrUn_... Banana plastid 37.3 73.44
KRH51269 Soybean nucleus 73.02 73.31
Solyc01g102760.2.1 Tomato nucleus 71.43 72.58
VIT_12s0035g01980.t01 Wine grape nucleus 72.62 72.33
PGSC0003DMT400047018 Potato nucleus 70.24 71.37
GSMUA_Achr8P30680_001 Banana nucleus 71.03 71.31
Solyc01g102750.2.1 Tomato nucleus 69.84 70.68
Bra024817.1-P Field mustard nucleus 68.65 70.33
CDY17436 Canola cytosol, nucleus, plastid 67.86 70.08
CDY04130 Canola cytosol, nucleus, plastid 67.86 70.08
Bra017415.1-P Field mustard cytosol, nucleus, plastid 67.86 70.08
CDY03049 Canola cytosol 67.86 69.8
AT2G02470.1 Thale cress cytosol, nucleus, plastid 69.05 67.97
AT1G14510.1 Thale cress nucleus 67.46 67.46
CDX84026 Canola nucleus 65.87 66.4
CDX81645 Canola cytosol 63.89 66.26
CDY53545 Canola cytosol 63.49 65.84
Bra016698.1-P Field mustard cytosol 65.08 65.6
CDX96851 Canola cytosol 65.08 65.6
CDY17593 Canola cytosol 30.56 65.25
Bra026825.1-P Field mustard nucleus 63.1 65.16
CDY65375 Canola nucleus 61.9 63.93
GSMUA_Achr2P18960_001 Banana nucleus 60.32 62.81
Bra026210.1-P Field mustard nucleus 62.3 62.8
GSMUA_Achr10P... Banana nucleus 59.52 61.98
CDY45267 Canola nucleus 50.0 61.76
GSMUA_Achr7P15530_001 Banana nucleus 59.13 61.57
GSMUA_Achr10P... Banana nucleus 58.33 58.33
GSMUA_Achr10P... Banana nucleus 46.03 50.88
GSMUA_Achr10P... Banana cytosol 29.37 49.33
GSMUA_Achr10P... Banana cytosol 35.32 49.17
GSMUA_Achr10P... Banana nucleus 48.41 46.92
GSMUA_AchrUn_... Banana nucleus 53.97 45.03
GSMUA_Achr10P... Banana nucleus 9.52 42.86
GSMUA_Achr10P... Banana cytosol 30.16 39.79
GSMUA_Achr10P... Banana cytosol 28.97 37.82
GSMUA_Achr10P... Banana extracellular 21.03 36.81
Protein Annotations
MapMan:15.5.8Gene3D:3.30.40.10InterPro:AlfinGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0042393GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr11G26440_001EnsemblPlants:GSMUA_Achr11P26440_001EnsemblPlants:GSMUA_Achr11T26440_001InterPro:IPR013083
InterPro:IPR019787UniProt:M0RVM4PFAM:PF00628PFAM:PF12165ScanProsite:PS01359PFscan:PS50016
PANTHER:PTHR12321PANTHER:PTHR12321:SF77SMART:SM00249SUPFAM:SSF57903UniParc:UPI000294BF5CInterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
PHD finger protein At5g26210 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26440_001]
Coordinates
chr11:-:25247876..25253544
Molecular Weight (calculated)
28722.5 Da
IEP (calculated)
5.136
GRAVY (calculated)
-0.851
Length
252 amino acids
Sequence
(BLAST)
001: MDEDEVARVS RTPEEVFRDF RGRRAGMIKA LTTDVDKFYQ QCDPEKENLC LYGFPNETWE VNLPAEEVPP ELPEPALGIN FARDGMAEKD WLSLVAVHSD
101: AWLLAVAFYF GARFGFDKES RRQLHNMINN LPTIYEVVTG TVKQQSREKN PNGTSKSNKS SSKKAEPQKP SKMPPSKEED GSRVEDAEEN EEHENTLCGA
201: CGDNYANDEF WICCDMCEKW FHGKCVRITP ARAEHIKQYK CPSCSNNKRG RA
Best Arabidopsis Sequence Match ( AT1G14510.1 )
(BLAST)
001: MEGIQHPIPR TVEEVFSDFR GRRAGLIKAL STDVQKFYHQ CDPEKENLCL YGLPNETWEV NLPVEEVPPE LPEPALGINF ARDGMQEKDW ISLVAVHSDS
101: WLISVAFYFG ARFGFGKNER KRLFQMINDL PTIFEVVTGN AKQSKDQSAN HNSSRSKSSG GKPRHSESHT KASKMSPPPR KEDESGDEDE DDEQGAVCGA
201: CGDNYGGDEF WICCDACEKW FHGKCVKITP AKAEHIKHYK CPSCTTSKKM KA
Arabidopsis Description
AL7AtAL7 [Source:UniProtKB/TrEMBL;Acc:A0A178WNG6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.