Factsheet for GSMUA_Achr6P30890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16220_001	Banana	nucleus	70.02	75.2
Solyc07g006060.2.1	Tomato	nucleus	30.54	66.67
HORVU3Hr1G083480.1	Barley	nucleus, peroxisome	25.33	57.38
PGSC0003DMT400028986	Potato	endoplasmic reticulum, extracellular	19.93	56.91
VIT_11s0037g00880.t01	Wine grape	nucleus	50.65	55.06
Zm00001d051057_P002	Maize	nucleus	45.44	51.69
CDY36467	Canola	nucleus	46.55	50.51
AT4G30860.1	Thale cress	nucleus	46.74	50.5
Bra010270.1-P	Field mustard	nucleus	46.37	50.4
CDY23260	Canola	nucleus	45.81	49.8
OQU80550	Sorghum	nucleus	29.98	49.69
KRH54981	Soybean	plastid	48.23	49.24
KXG30618	Sorghum	nucleus	48.42	44.29
GSMUA_Achr1P23230_001	Banana	cytosol	22.53	40.33
TraesCS3D01G369900.1	Wheat	plastid	33.71	40.13
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	33.71	36.27
TraesCS6B01G249100.1	Wheat	nucleus	47.3	34.05
TraesCS6D01G202600.1	Wheat	nucleus	47.3	33.29
TraesCS6A01G219600.1	Wheat	nucleus	47.3	33.12
GSMUA_Achr2P12180_001	Banana	nucleus	22.53	32.44
GSMUA_Achr10P...	Banana	nucleus	15.83	15.48
GSMUA_AchrUn_...	Banana	nucleus	14.34	9.99
GSMUA_Achr2P06290_001	Banana	nucleus	15.46	8.75
GSMUA_Achr1P24850_001	Banana	nucleus	13.78	8.4
GSMUA_Achr8P28030_001	Banana	nucleus	15.27	8.21
GSMUA_Achr10P...	Banana	nucleus	14.53	8.0
GSMUA_Achr1P18360_001	Banana	nucleus	12.85	6.72
GSMUA_AchrUn_...	Banana	nucleus	13.41	6.26
GSMUA_Achr9P08570_001	Banana	nucleus	21.97	5.82
GSMUA_Achr7P17070_001	Banana	nucleus	16.2	4.29

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	Gene3D:3.30.40.10	InterPro:AWS_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
EnsemblPlantsGene:GSMUA_Achr6G30890_001	EnsemblPlants:GSMUA_Achr6P30890_001	EnsemblPlants:GSMUA_Achr6T30890_001	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616
InterPro:IPR006560	InterPro:IPR013083	InterPro:IPR025787	UniProt:M0TBN4	PFAM:PF00856	ScanProsite:PS01359
PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578	PANTHER:PTHR22884	PANTHER:PTHR22884:SF455
InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF82199	UniParc:UPI000295EB05	InterPro:Zinc_finger_PHD-type_CS
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

Histone-lysine N-methyltransferase ASHR3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30890_001]

Coordinates

chr6:+:30829801..30848014

Molecular Weight (calculated)

61120.5 Da

IEP (calculated)

8.781

GRAVY (calculated)

-0.317

Length

537 amino acids

Sequence
(BLAST)

001: MLALPIISRP RRPPFFPPLA PRSFHTPLSL SLSNKEKTKT IIKETRRGMK NPKILDAGDA GLDRKCSRPF KQERKTGKKA ADGKASLADH VSAWREKKMA
101: AGVPDRECFL PFLTNAPRMV DCHMCNRCIY PGEELRCSVL GCQEAYHLTC AKKLIGPSTS KPFKCPQHGC FVCKQKAYWR CVRCTMAAHT KCAPWPANVI
201: YFKNRPGRAI CWRHSSDWRL EKKEAFVRLP LPYVDEEFKM GTILKDVVEN KTEPAPYVHI RRNVYLIKKK RDGAETGVGC SNCGSNSTCK ENCECRGLSV
301: SCSKACRCSD MCRNRPFRKE KTIKVVKTEY CGWGVVALEV MEKGDFVIEY IGEVIDDALC EQRLWDMKHR GDQNFYMCEI HKDFTIDATF KGNASRFLNH
401: NCDPNCKLEK WQVDGETRVG VFALRSVDIG EPLTYDYRFV HFGPMVKCQC GASKCQGYLG SKRKLNQMPS SWGSLGSKIW HPCLLCCFFV FNLCPTFICF
501: SLTAIASHLT YCCCSICCYC IQYDLLYEID IKQVIGV

Best Arabidopsis Sequence Match ( AT4G30860.1 )
(BLAST)

001: MLDLGNMSMS ASVALTCCPS FLPAASGPEL AKSINSPENL AGECNGKHLP MIPPEEEVKD IKIANGVTAF TRKQNPSDRV KKGFVLDDHV KDWVKRRVAS
101: GVSESTCFLP FLVGAKKMVD CLVCHKPVYP GEDLSCSVRG CQGAYHSLCA KESLGFSKSS KFKCPQHECF VCKQRTQWRC VKCPMAAHDK HSPWSKEILH
201: LKDQPGRAVC WRHPTDWRLD TKHAVAQSEI EEVFCQLPLP YVEEEFKIDL AWKDSVVKED PPSYVHIRRN IYLVKKKRDN ANDGVGCTNC GPNCDRSCVC
301: RVQCISCSKG CSCPESCGNR PFRKEKKIKI VKTEHCGWGV EAAESINKED FIVEYIGEVI SDAQCEQRLW DMKHKGMKDF YMCEIQKDFT IDATFKGNAS
401: RFLNHSCNPN CVLEKWQVEG ETRVGVFAAR QIEAGEPLTY DYRFVQFGPE VKCNCGSENC QGYLGTKRKE PNCLVVSWGA KRRRLFHRPI ARKPQQD

Arabidopsis Description

ASHR3SDG4 [Source:UniProtKB/TrEMBL;Acc:A0A178UX33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.