Factsheet for HORVU3Hr1G083480.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus

Predictor Summary:

peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80550	Sorghum	nucleus	69.2	50.62
TraesCS3D01G369900.1	Wheat	plastid	94.09	49.45
Solyc07g006060.2.1	Tomato	nucleus	49.37	47.56
PGSC0003DMT400028986	Potato	endoplasmic reticulum, extracellular	26.58	33.51
Zm00001d032143_P001	Maize	mitochondrion, nucleus, plastid	69.62	33.07
GSMUA_Achr7P16220_001	Banana	nucleus	57.81	27.4
VIT_11s0037g00880.t01	Wine grape	nucleus	56.54	27.13
HORVU5Hr1G054880.2	Barley	mitochondrion	41.77	25.85
KRH54981	Soybean	plastid	56.54	25.48
GSMUA_Achr6P30890_001	Banana	mitochondrion	57.38	25.33
AT4G30860.1	Thale cress	nucleus	52.32	24.95
CDY23260	Canola	nucleus	51.05	24.49
CDY36467	Canola	nucleus	51.05	24.44
Bra010270.1-P	Field mustard	nucleus	50.63	24.29
HORVU7Hr1G103420.7	Barley	nucleus	41.77	23.97
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	31.65	14.88
HORVU7Hr1G026910.29	Barley	cytosol, nucleus	21.52	6.48
HORVU7Hr1G026840.1	Barley	cytosol, mitochondrion, nucleus	21.94	5.66
HORVU3Hr1G027580.1	Barley	plastid	23.21	5.52
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	20.68	5.37
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	23.21	5.37
HORVU5Hr1G051100.8	Barley	nucleus	21.52	4.44
HORVU2Hr1G000940.11	Barley	nucleus	32.07	4.19
HORVU5Hr1G088420.21	Barley	plastid	28.69	3.48
HORVU0Hr1G020960.1	Barley	nucleus	3.8	2.1

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	UniProt:A0A287LZX8	InterPro:AWS_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
EnsemblPlantsGene:HORVU3Hr1G083480	EnsemblPlants:HORVU3Hr1G083480.1	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
InterPro:IPR025787	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578
PANTHER:PTHR22884	PANTHER:PTHR22884:SF455	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF82199
UniParc:UPI000B473A84	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:603781933..603785533

Molecular Weight (calculated)

27322.6 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.582

Length

237 amino acids

Sequence
(BLAST)

001: EAFRRLPLPY IDQEFNIDSI KKEELESVTK PPPYVHLKHN VYFVKKKCDG DPIEAKCSDC DPPLTCQIRC SCRSVSISCS QACKCSKKCT NRPFRREKKI
101: GVVKTEHCGW GAIALETIEK GDFVIEFVGE VIDGARFEER LQDMKRRRDQ NFYMCKVNNN FIIDATFRGN DCRFFNHSCR PNCQLDNWQV NGKTRLGVFS
201: LQGIQVGEPL TYNYSFEQHF GPQTECFCGA ENCRGKL

Best Arabidopsis Sequence Match ( AT4G30860.1 )
(BLAST)

001: MLDLGNMSMS ASVALTCCPS FLPAASGPEL AKSINSPENL AGECNGKHLP MIPPEEEVKD IKIANGVTAF TRKQNPSDRV KKGFVLDDHV KDWVKRRVAS
101: GVSESTCFLP FLVGAKKMVD CLVCHKPVYP GEDLSCSVRG CQGAYHSLCA KESLGFSKSS KFKCPQHECF VCKQRTQWRC VKCPMAAHDK HSPWSKEILH
201: LKDQPGRAVC WRHPTDWRLD TKHAVAQSEI EEVFCQLPLP YVEEEFKIDL AWKDSVVKED PPSYVHIRRN IYLVKKKRDN ANDGVGCTNC GPNCDRSCVC
301: RVQCISCSKG CSCPESCGNR PFRKEKKIKI VKTEHCGWGV EAAESINKED FIVEYIGEVI SDAQCEQRLW DMKHKGMKDF YMCEIQKDFT IDATFKGNAS
401: RFLNHSCNPN CVLEKWQVEG ETRVGVFAAR QIEAGEPLTY DYRFVQFGPE VKCNCGSENC QGYLGTKRKE PNCLVVSWGA KRRRLFHRPI ARKPQQD

Arabidopsis Description

ASHR3SDG4 [Source:UniProtKB/TrEMBL;Acc:A0A178UX33]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.