Factsheet for HORVU5Hr1G054880.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G184500.1	Wheat	nucleus	85.12	91.83
TraesCS5B01G177800.2	Wheat	nucleus	85.64	90.61
TraesCS5A01G179900.1	Wheat	nucleus	85.12	90.06
TraesCS7B01G354300.1	Wheat	nucleus	78.59	88.53
TraesCS7D01G443000.1	Wheat	nucleus	77.81	88.17
TraesCS7A01G453700.1	Wheat	nucleus	77.28	87.57
HORVU7Hr1G103420.7	Barley	nucleus	78.07	72.4
Os09t0307800-01	Rice	cytosol	63.19	71.18
Zm00001d005563_P006	Maize	nucleus	56.4	63.72
Zm00001d020038_P001	Maize	nucleus	56.4	60.67
GSMUA_Achr1P23230_001	Banana	cytosol	47.0	60.0
OQU89246	Sorghum	nucleus	56.4	57.91
AT2G44150.1	Thale cress	nucleus	47.52	50.14
KRH38763	Soybean	cytosol	45.43	49.86
KRH09264	Soybean	nucleus	45.43	49.86
CDX79778	Canola	cytosol	44.65	46.85
AT3G59960.1	Thale cress	nucleus	40.21	46.81
Bra004809.1-P	Field mustard	nucleus	45.17	46.76
CDY17880	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.95	46.68
Bra007496.1-P	Field mustard	nucleus	41.51	46.22
CDY41194	Canola	nucleus	41.25	45.53
CDX71856	Canola	nucleus	41.51	44.17
KRH75137	Soybean	cytosol	14.62	44.09
Bra000343.1-P	Field mustard	cytosol	41.51	43.92
CDX98400	Canola	nucleus	36.29	43.3
CDX83438	Canola	cytosol	41.51	43.09
CDX67818	Canola	nucleus	35.77	42.68
CDX95590	Canola	nucleus	40.47	42.47
PGSC0003DMT400010951	Potato	cytosol	25.33	42.17
HORVU3Hr1G083480.1	Barley	nucleus, peroxisome	25.85	41.77
Bra003396.1-P	Field mustard	cytosol	27.68	40.93
Solyc12g100290.1.1	Tomato	nucleus	44.91	39.63
VIT_16s0039g00740.t01	Wine grape	mitochondrion	46.48	39.21
Solyc01g006220.2.1	Tomato	endoplasmic reticulum	43.34	36.81
HORVU2Hr1G074910.11	Barley	cytosol, nucleus	23.76	18.06
HORVU7Hr1G026910.29	Barley	cytosol, nucleus	15.4	7.5
HORVU7Hr1G026840.1	Barley	cytosol, mitochondrion, nucleus	15.93	6.64
HORVU3Hr1G059080.11	Barley	cytosol, mitochondrion, nucleus, plastid	17.75	6.63
HORVU4Hr1G053740.8	Barley	cytosol, mitochondrion, nucleus	15.4	6.47
HORVU3Hr1G027580.1	Barley	plastid	16.71	6.42
HORVU5Hr1G051100.8	Barley	nucleus	16.19	5.4
HORVU2Hr1G000940.11	Barley	nucleus	24.54	5.19
HORVU5Hr1G088420.21	Barley	plastid	18.28	3.58
HORVU0Hr1G020960.1	Barley	nucleus	2.61	2.34

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.4	Gene3D:2.170.270.10	UniProt:A0A287R9P1	InterPro:AWS_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
EnsemblPlantsGene:HORVU5Hr1G054880	EnsemblPlants:HORVU5Hr1G054880.2	InterPro:Hist-Lys_N-MeTrfase_SET2_plant	InterPro:IPR001214	InterPro:IPR003616	InterPro:IPR006560
InterPro:IPR025787	PFAM:PF00856	PFscan:PS50280	PFscan:PS50868	PFscan:PS51215	PFscan:PS51578
PANTHER:PTHR22884	PANTHER:PTHR22884:SF455	InterPro:Post-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00508
SMART:SM00570	SUPFAM:SSF82199	UniParc:UPI000B465F37	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:+:430519632..430535517

Molecular Weight (calculated)

44110.6 Da

IEP (calculated)

8.162

GRAVY (calculated)

-0.482

Length

383 amino acids

Sequence
(BLAST)

001: GSFRRRPRVT LGSRSMLSDS RSDACATVAC SRSSPARVSW GPERVFDELT KALKDPADFV DFDLPSALKE WKLGYYIPIK RNVYLTKKRV EDDGIFCSCS
101: LSSGSPVTCG KDCQCGMLFS CCSSNCKCEN NCANKSFQLR PLFKTKLIKT EKCGFGLIAE DEIKKGEFVI EYVGEVIDDR TCEERLWKMK RQRYTNFYLC
201: EVSSNMVIDA TNKGNKSRFI NHSCEPNTEM QKWTVDGETR VGIFALRDIE RGEELTYDYK FVQFGADQDC HCGSSNCRKM VGTSKSVNSF ILHNGNSANS
301: QDQHDMKKRK TTSDNCIGEI IRLWDRRDKM YVPAVVHDYD EYTGMHTVSF LTYNFYMISN EQFIYYLFWF SYCLMKKLLK NLI

Best Arabidopsis Sequence Match ( AT2G44150.1 )
(BLAST)

001: MPASKKISDR NHLGQVFDKL LNQIGESEEF ELPEWLNKGK PTPYIFIRRN IYLTKKVKRR VEDDGIFCSC SSSSPGSSST VCGSNCHCGM LFSSCSSSCK
101: CGSECNNKPF QQRHVKKMKL IQTEKCGSGI VAEEEIEAGE FIIEYVGEVI DDKTCEERLW KMKHRGETNF YLCEITRDMV IDATHKGNKS RYINHSCNPN
201: TQMQKWIIDG ETRIGIFATR GIKKGEHLTY DYQFVQFGAD QDCHCGAVGC RRKLGVKPSK PKIASDEAFN LVAHELAQTL PKVHQNGLVN RHIDAGKSWN
301: NLSQRDTCSR NCIGVVIRLS RPTSDRCFGL VRHFDEYSRK HSVMFEDGVT EFVDMSREDW EIV

Arabidopsis Description

ASHH3SDG7 [Source:UniProtKB/TrEMBL;Acc:A0A178VNH9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.